Transcript Information: S_Transcript_287373.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.623063503584
Replicate 214.306340103701
Replicate 319.451323213173
Condition 2: 8 Hour
Replicate 10.83302305926301
Replicate 21.0486804049872
Replicate 31.998360712967
Condition 3: 24 Hour
Replicate 118.431620445189
Replicate 222.486750548407
Replicate 317.143108306602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_287373.p1 GENE.S_Transcript_287373~~S_Transcript_287373.p1 ORF type:5prime_partial len:128 (+),score=31.15 S_Transcript_287373:1-384(+)
AGCAAGTTTGAGGAGGACCACGGCAAGTTTTCTAACAACATTTTCAAGATATCCCAAGAGATTCAGGGCGTAAAGCGTTGTTTAACAGGAAAGAATATCGAAAGAGAACAGCTGAAGAAGGAGCTAGGCGATGTAAATGATAGGGTCAAGAAGCAAAATGGAGAGATGGAGGAGTTGCAACGTGCAGTTAGCCAACTGACGAAAGCAGCAGGAGAGCTCAATGTGACATTGAAGGAAAAAGATGAGCAACTTTCATCTCTTGCGGAGGAGAAACGCCAGGCCATCAGCCAACTGTGCTTGTGGAGCGATAATCTCCAGGGTCGCTATGATGAACTAAAGAGCATTGTGTCAAAGGCAACTTCAGAGAGGCGGGTGAGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_287373.p1 GENE.S_Transcript_287373~~S_Transcript_287373.p1 ORF type:5prime_partial len:128 (+),score=31.15 S_Transcript_287373:1-384(+)
SKFEEDHGKFSNNIFKISQEIQGVKRCLTGKNIEREQLKKELGDVNDRVKKQNGEMEELQRAVSQLTKAAGELNVTLKEKDEQLSSLAEEKRQAISQLCLWSDNLQGRYDELKSIVSKATSERRVSR*

Click here to download the sequence:
Link to NCBI Protein BLAST