Transcript Information: S_Transcript_28769.p2


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value1E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6404577161332
Replicate 24.579069530805
Replicate 33.4797615252077
Condition 2: 8 Hour
Replicate 114.283987853929
Replicate 211.819089847403
Replicate 310.255737998623
Condition 3: 24 Hour
Replicate 18.0372684540865
Replicate 25.5590481225003
Replicate 37.5547161307777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28769.p2 GENE.S_Transcript_28769~~S_Transcript_28769.p2 ORF type:complete len:424 (+),score=49.96,SURNod19|PF07712.8|1.2e-163 S_Transcript_28769:3651-4922(+)
ATGAGAATCTTTAACTTGTTCACTCTTTTGAGATATACAGAAAAGATGACAAGAAATCAGTTCTCATGGTTCTACTCCTTAGCAATACTCTTGGCTCTCTCCTCTGAAATCTCCTTTTCTCATGCACAATCTAAGGCTGCGATCAAATCAGCTGTTTACTTATCACCTGCAATAACCCTGAAACCCGGATCAGTCGAAAACAGATTATTCTACAAAGTTGATTTTCCAAAGGGACACATTGGCATTAAGAGTTTCTATGCAGAATTAGTCAATGAGGCCGGAGAATCGATCCCCCTTGTAGAAACATACATGCACCATTGGGCAGTTTTCAGATACTATGTCAACTTACAAAATCATTCAGATTTGATACTTGTCAGGAACAGTGGAGTTTGCCCTGATAATCTTCTTGGGCAGTATTTTGGGATGGGTTCTGAAACCCGGAAAACTGACACACATGTTCCCGACCCTTATGCCATCGAAGTAGGAAACCCTTCGGAAGTTCCACAAGGGTATGCAGAAGGATGGCTTCTTAACGTTCATGCAATTGATCTACGTGGTGTGGTGAACAGGACAGCTTGCACAGAGTGCAGGTGTAGCTTTTACAATGTAACCAAAGACGAGACTGGAAAGCCCTTGAAGCCCGGCTATGAAGGGGGATTCCACTGTTGCTATAATCAGACACATTGTATAGTAAAAGAAGGTGTTGCCCCCTCACCGAGGAGGGTATACTTGAGGTACACTGTCAAGTGGGTTGATTGGGATCAATCTGTGCTGCCTGTCAGGTTTTATATCTTGGATGTTACTGACACCACAACGACATCCATAAGTTCTGTCGCACCTACAAAGCATCACTGCAAGATTGAGTATGAAGTCAAGCCTTGTAAATATACCGATGGTAAAGCGTGTATGGACACCAAAAGGACAAAAATTGTTATTCCAAAAGGTGGCTATGTGGTTTATGGTGTTGGCCTTCAGTACCCAGGAGGAATTGGTGCATCTCTTTATAGAAAGGATGGACAGGTGATCTGTTCCTCGAAGCCGATATATGGGAAGGGGACGGAAGTAGGAAATGAGGCTGGATATATCGTTGGAATGTCAACCTGTTATCCTCAACCAGGCTCTGTACATATATCAGATGGAGAAACCGTGGTTCTTGAATCCAACTATAACAGTTCTGCAGAACACCCTGGTGCTGCTGGTTTTATCAAAATTATGGTTGCTGATCAAGCACCTAAGGACAAAAGCTTTTTCGAGAGCCTCAAAGTTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28769.p2 GENE.S_Transcript_28769~~S_Transcript_28769.p2 ORF type:complete len:424 (+),score=49.96,SURNod19|PF07712.8|1.2e-163 S_Transcript_28769:3651-4922(+)
MRIFNLFTLLRYTEKMTRNQFSWFYSLAILLALSSEISFSHAQSKAAIKSAVYLSPAITLKPGSVENRLFYKVDFPKGHIGIKSFYAELVNEAGESIPLVETYMHHWAVFRYYVNLQNHSDLILVRNSGVCPDNLLGQYFGMGSETRKTDTHVPDPYAIEVGNPSEVPQGYAEGWLLNVHAIDLRGVVNRTACTECRCSFYNVTKDETGKPLKPGYEGGFHCCYNQTHCIVKEGVAPSPRRVYLRYTVKWVDWDQSVLPVRFYILDVTDTTTTSISSVAPTKHHCKIEYEVKPCKYTDGKACMDTKRTKIVIPKGGYVVYGVGLQYPGGIGASLYRKDGQVICSSKPIYGKGTEVGNEAGYIVGMSTCYPQPGSVHISDGETVVLESNYNSSAEHPGAAGFIKIMVADQAPKDKSFFESLKVN*

Click here to download the sequence:
Link to NCBI Protein BLAST