Transcript Information: S_Transcript_28770.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value2E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9470393821632
Replicate 29.9837204142944
Replicate 39.2041960342737
Condition 2: 8 Hour
Replicate 193.521963122622
Replicate 288.362553007188
Replicate 393.599196745896
Condition 3: 24 Hour
Replicate 122.007601430934
Replicate 217.0506142958
Replicate 319.679770215537


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28770.p1 GENE.S_Transcript_28770~~S_Transcript_28770.p1 ORF type:complete len:537 (+),score=66.46,SURNod19|PF07712.8|1.4e-187 S_Transcript_28770:250-1860(+)
ATGATAAAACTCATCAAAAATATCTACAAGTATACTACAAATATAATAATATTGGATATGGAGTTGGAGTACACTGTACATGGATATATCTTGATTCTTGAATATTATTGTGTTCGGCGATACCAATCACAGTATACCAGTTCCACTATCACTAGCTCAAGCTGTCTGTTTGGCGTTCAACCCCAACCCAATCAATCAAACCCATCAGAAAGGATGGCAAAGCCTAAGTCATCACTGTTATATTGGTTATGCATAGCCCTTGTATTGTCTGCTGAAATTACATGGGCTCGTACACAGCAACAAACCACAATGAAATCTGCTGTTTATTTATCACCTGAATTTGTTATGGAACCTGGATCAGTAGCAAACAAATTCTACTACAATATCGACTTCCCAAAGGGCCACATAGGCTTAAAGAGTTTCAACGCTGAAGTAGTTGACGAATTTGGAGTGCCTGTCCCCCTTCACGACACTTACCTCCACCATTGGTTGGTTGTAAGATACTATTTACGTGTAGGTTTTGAAGATAAGGGGCTTGGTAGCAATCCTGAACTTCACCACAGGTCAGATTTTCTACTGGTAGGAAACAGTGGACTGTGTGACAAGCATACTCTAGGGCAGTATTTTGGATTGGGATCTGAAACCCGAAAAACTGCCACATATGTACCGGATCCTTATGCAATTGAAGTTGGGAATTCAGACGAAGTACCACCAGGGTATGAGGAGAGATGGCTTCTTAATGTTCATGCGATTGATACTCGAGGTGTGGTGGATAGGTTGGGATGCACAGAGTGCAGGTGTGATCTCTACAATGTTACTGTCGATGAATATGGCAGACCCTTGAGCCCTGATTATGAAGGTGGCCTGTATTGTTGCTACGATCAAACACAATGCAAGTTGAACGAAGGTTCTGGACATTCACCTAGGAAGTTGTACTTAAGATACACTGTGAAGTGGTATGATTGGGATGAATCTATTCTCCCTGTCAAGATATATATCTTTGATATAACTGATACCGGGAAGACATCCGAGACCTCCACAGCATCTAATGCAAATCATCACTGCAAGATTGAGTATGAAATTGAGGCTTGCGAATCATCTGCTACGTCTGTTGATGGGTGCACTGACTCCAAGAGGATGACCTTTGTGATGCCAAGAGGCGGCTATGTGATTTATGGTGTTGCTCACCAGCACTCAGGAGGAATTGGCACAGCTCTTTATAGAAAGGATGGCCAAGTAATTTGCTCTTCAATGCCCTCCTATGGAATGGGGCAAGAGGCTGGAAACGAGACTGGATATATTGTAGGAATGTCAACTTGCTATCCTCACCCTGGCTCTGTAGAACTACTGGATGGAGAGACTCTGGTTCTTGAGTCCAACTATAGCAGTTCTCAAAGACACACCGGAGTTATGGGTCTTTTCTACATTTTGGTTGCTGATCAATTGCCAAGCCAAAAAAGCTCTTATGAGGCTCGAAATTATGTTGGTGCCGTACACATACCTGTCTCAGCTTGGGTAGTGCTTATCGGGGCACTTGCCATGGTTGCTCTCACTGCTTTTAGCTATCAGAGGAATCAAGGGGAAGATGGCTACCAGGCAATCTTGACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28770.p1 GENE.S_Transcript_28770~~S_Transcript_28770.p1 ORF type:complete len:537 (+),score=66.46,SURNod19|PF07712.8|1.4e-187 S_Transcript_28770:250-1860(+)
MIKLIKNIYKYTTNIIILDMELEYTVHGYILILEYYCVRRYQSQYTSSTITSSSCLFGVQPQPNQSNPSERMAKPKSSLLYWLCIALVLSAEITWARTQQQTTMKSAVYLSPEFVMEPGSVANKFYYNIDFPKGHIGLKSFNAEVVDEFGVPVPLHDTYLHHWLVVRYYLRVGFEDKGLGSNPELHHRSDFLLVGNSGLCDKHTLGQYFGLGSETRKTATYVPDPYAIEVGNSDEVPPGYEERWLLNVHAIDTRGVVDRLGCTECRCDLYNVTVDEYGRPLSPDYEGGLYCCYDQTQCKLNEGSGHSPRKLYLRYTVKWYDWDESILPVKIYIFDITDTGKTSETSTASNANHHCKIEYEIEACESSATSVDGCTDSKRMTFVMPRGGYVIYGVAHQHSGGIGTALYRKDGQVICSSMPSYGMGQEAGNETGYIVGMSTCYPHPGSVELLDGETLVLESNYSSSQRHTGVMGLFYILVADQLPSQKSSYEARNYVGAVHIPVSAWVVLIGALAMVALTAFSYQRNQGEDGYQAILT*

Click here to download the sequence:
Link to NCBI Protein BLAST