Transcript Information: S_Transcript_288003.p1


Annotated TAIR IDAT1G16830.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5760793-5762619 | Forward length=608
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.22491141565366
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.26640101817798
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288003.p1 GENE.S_Transcript_288003~~S_Transcript_288003.p1 ORF type:internal len:82 (+),score=23.74,PPR_2|PF13041.2|7.4e-14,PPR_2|PF13041.2|1.2e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|3.8e-08,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|1.9e-06,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|3.7e-07 S_Transcript_288003:2-244(+)
TTAGGGCTCATGATTGGTTTAGGAATCCAAGTCTCTGTAGCTGTTTGGAATATTTTGATTGATGGATTGTGCAGAACAGGAAGGCCTGTTGCTGCTTCTAAGATACTAGATAAGATGATTGGTAGTGGTTGTTCTTCAAATGTTGTGACTTACACTTCTTTACTGAGGGCATTTATGGAGTTTGAAATGGTTGATGATGCTTTTAGGATACTTTCAATGATGGAAGAAAATGGATGCGAACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288003.p1 GENE.S_Transcript_288003~~S_Transcript_288003.p1 ORF type:internal len:82 (+),score=23.74,PPR_2|PF13041.2|7.4e-14,PPR_2|PF13041.2|1.2e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|3.8e-08,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|1.9e-06,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|3.7e-07 S_Transcript_288003:2-244(+)
LGLMIGLGIQVSVAVWNILIDGLCRTGRPVAASKILDKMIGSGCSSNVVTYTSLLRAFMEFEMVDDAFRILSMMEENGCEP

Click here to download the sequence:
Link to NCBI Protein BLAST