Transcript Information: S_Transcript_288120.p1


Annotated TAIR IDAT1G34220.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12463102-12465911 | Reverse length=649
E-Value6E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3714555556101
Replicate 21.8931766617009
Replicate 31.4608107788991
Condition 2: 8 Hour
Replicate 12.6040905667786
Replicate 22.8795448744203
Replicate 32.0401306288596
Condition 3: 24 Hour
Replicate 12.3070504016469
Replicate 22.8423262042944
Replicate 32.8301964018942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288120.p1 GENE.S_Transcript_288120~~S_Transcript_288120.p1 ORF type:internal len:303 (-),score=92.34,Ist1|PF03398.10|1.3e-41 S_Transcript_288120:2-907(-)
GTGGAGCATATAATAAGAGATGAGAATATGATGGCTGCCCAAGAGATCCTAGAACTCTACTGTGAGCTTATTGCTGTTCGCCTTCCCATTATCGAATCACAGAGGGAATGTCCATTGGACTTGAAAGAAGCAATATCAAGTATCTGCTTTGCTGCACCAAGATGTGCTGACTTGCCTGAGCTGCTGCAAGTACAGATGTCATTTGCTTCCAAATATGGAAAAGAATTTGTTGCTGCTGCTACTGAGCTTATGCCAAATTGTGGTGTTAATCGGCAGTTGATAGAGTTGCTGTCTGTCCGTGCTCCTCCTCCAGAAAAGAAATTGAAGTTGCTGAAAGAAATTGCCGAAGAGCATGAAATAGATTGGGATCCAGCTCCTTCTGAAACTGAACTTTTCAGATCCCATGAAGATCTTTTGAATGGACCATCACAATTTGTAACCGGATCTAAAGTGCCACTTCGTAGCACAAAACATGATGAAATTTTGTACTCTGCCTCAGTCCCGGCTGCTGGAGAACATAATGATTCTGAAGACGGCTTTGACGATTTGGAGTTCCCGGAAGTCCCCAAGGTGTCATTGAGACCAGGAGCAGGTTCAGATGTGGCATCACCACAGCCTTCAGCTCCACATCAACAACCAGATCATGCATCTGCAACAGAGGTTGAAAGTCCAAGAAATGCTGAGTCAGTCATTGATCCTGATGATACTATACAGGCTGTAAGGCATGTGTCACCCGAGTCTTCAGCCAATCCTGCAGAGCAAAAACAATTTTTGCCATTCCTATCTCCCCCGCCGTTGTCGCCAACATTGTTCCCTGCAAAAGAAAGCAGCCATCCTTCCCCCTCACCATCAATGTCACCAGCATCTTTCCCTGAACGAGAAATCAATCGGTCCCCACCTCCTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288120.p1 GENE.S_Transcript_288120~~S_Transcript_288120.p1 ORF type:internal len:303 (-),score=92.34,Ist1|PF03398.10|1.3e-41 S_Transcript_288120:2-907(-)
VEHIIRDENMMAAQEILELYCELIAVRLPIIESQRECPLDLKEAISSICFAAPRCADLPELLQVQMSFASKYGKEFVAAATELMPNCGVNRQLIELLSVRAPPPEKKLKLLKEIAEEHEIDWDPAPSETELFRSHEDLLNGPSQFVTGSKVPLRSTKHDEILYSASVPAAGEHNDSEDGFDDLEFPEVPKVSLRPGAGSDVASPQPSAPHQQPDHASATEVESPRNAESVIDPDDTIQAVRHVSPESSANPAEQKQFLPFLSPPPLSPTLFPAKESSHPSPSPSMSPASFPEREINRSPPPS

Click here to download the sequence:
Link to NCBI Protein BLAST