Transcript Information: S_Transcript_288148.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7603714638623
Replicate 21.0085846654864
Replicate 30.63232238000916
Condition 2: 8 Hour
Replicate 10.73115623944456
Replicate 21.1505522157574
Replicate 30.85263390419925
Condition 3: 24 Hour
Replicate 10.49931162264215
Replicate 20.25901498944397
Replicate 31.4412596802924


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288148.p2 GENE.S_Transcript_288148~~S_Transcript_288148.p2 ORF type:complete len:175 (+),score=9.04,zf-RVT|PF13966.2|3.1e-16,zf-RVT|PF13966.2|6.7e+03 S_Transcript_288148:2761-3285(+)
ATGCTACAGAAAGTAGTGGAGGCTAAAGAGGAGATGGCTATGACCGCAGGGGTTAGTACTCTAAATACCAGAAAGATTAAAGATTTTTATGAGCTAATGAGTAATAAAACCTCTAAAGTCCCTTGGTATCAGATGGTATGGACGAGTTTTGCTGGGCCTCAAACAAAAATCATCTCTTGGCTTTTGATGAACCAGAAACTGGCAACTAGAGATAAAATTACACGATGGATTCCCAATTGTGAACTAATATGTCCTCTGTGCAACAAGGATGATGAAAGTTGTGAACATCTATTCATTCATTGCCTATTTACTAAGGAAGTGTTTGCTAGAGTTTGGCAGGGTCCGTGTTGCACTTGGACTCAGGTGAATAGTTGGCAACATTTGGCGGAGAAGTGTATACAAAAGAGCAGGGGTAAAACCCCAAAAACCAAATACCTGAAAGCATCTATAGTAGAGTCTTGTTATCACATTTGGTGGGAGAGAAACCAGCAGGTCTTCAATCAACATATGAGATCCCCTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288148.p2 GENE.S_Transcript_288148~~S_Transcript_288148.p2 ORF type:complete len:175 (+),score=9.04,zf-RVT|PF13966.2|3.1e-16,zf-RVT|PF13966.2|6.7e+03 S_Transcript_288148:2761-3285(+)
MLQKVVEAKEEMAMTAGVSTLNTRKIKDFYELMSNKTSKVPWYQMVWTSFAGPQTKIISWLLMNQKLATRDKITRWIPNCELICPLCNKDDESCEHLFIHCLFTKEVFARVWQGPCCTWTQVNSWQHLAEKCIQKSRGKTPKTKYLKASIVESCYHIWWERNQQVFNQHMRSPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST