Transcript Information: S_Transcript_28818.p1


Annotated TAIR IDAT3G52170.1
Annotated Gene NameDNA binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19347039-19349099 | Reverse length=499
E-Value4E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4803049010118
Replicate 21.5004919850199
Replicate 31.3936576385592
Condition 2: 8 Hour
Replicate 12.6321010718879
Replicate 20.95798848079434
Replicate 32.20138476525
Condition 3: 24 Hour
Replicate 10.88039832707684
Replicate 20.97049067203503
Replicate 31.0165055679644


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28818.p1 GENE.S_Transcript_28818~~S_Transcript_28818.p1 ORF type:5prime_partial len:397 (-),score=71.66 S_Transcript_28818:5055-6245(-)
GCTGAACACACCACGGACTTGAGTATATTTCTGTTAGCAAGACTGATGAACGTTATCACAATATTTTTCACTGAATTGGTCTGCAGATACCAGTTCTCAAATAAAGGGAACTTTCCATCACTTAATCTCACACATAAGGAGGTCGGTGGGTCTTTCTATGTTGTTCGAGAGATTGTTAGAGAAATAATTCAAGAGAATAGAATTCTTGGTCCTGCCAGTTTTGATTCTGAAGCGCAAAATGATGATTCTATTTCAGAACAGTATCCATTGGGATCGATATCTAGGGAACCGCAAGATCTTTTCTTGCAGACAGAAAACAAGTTAAAGGTTGATTCCAATGAACAAATAAGAAAAAGCTTGGATATGACTTTAGATGGTAATGGGCACAATAGCAATCATCAGGATTTAGACTCTATTCAGCTCTGTATCGAACCTCAGACAGATGACTCTGATGAGCCTGCGTCTAGCGAACTAGTGACCATGGATCTTTCAGTGCCCAGTCAGCAGGAACTTGAAAATTTGGAGTTGTCTTTGGATAGGAATGAACAGCATTGTGATGAGAAAGTAATGGAAAATAGTCATTTGAACAATATGCAGACAAATGAACTACATGAAGAATGTGATAAATTGTTAATTGAAGAATCACCCATAAGAGAGACCCTTGAAGCAGATAGAGAAGTTGAATTGCAAGGAGCATCAAAAGTTGAACTAACTCTCCCAACAGAAATGGTAGAAGTGGAGACTTTCCCTTTAAGACCTTCCATTAAGGAAACTGATCACCTACATGTCACATCGACCGATATAGGGAATGTTAATGGAATATTGAACAAGTTGGAAACCAAACAGGTCCAAGGAAGCAGTAGCAGTCTTGTCCCAGATAGAAGCATTTCTCGTGATAGCCCATCTGACATGGTGACTGCAAAAAATGCACATGGTATGGAAATTCCAATGTCAGAGAAAGATGCGGAAGTCAATGCAAAAAATGCGGAAGTCAATGGTGTGGTACTCCAGAATAGAGAGGTCGATACCTCAAGCAATGGAATTGAACTGCCAGATTCGTCAATGATGAAAAAGGAGAATCGTAAATTTGTCAATGATCATAAGGACCAAATAGCATTACATATTGACTTAACATTAAAGACAGCTGATCAAAGTGAGGAACTCGAAGGGCTTCAGGTTAGTCTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28818.p1 GENE.S_Transcript_28818~~S_Transcript_28818.p1 ORF type:5prime_partial len:397 (-),score=71.66 S_Transcript_28818:5055-6245(-)
AEHTTDLSIFLLARLMNVITIFFTELVCRYQFSNKGNFPSLNLTHKEVGGSFYVVREIVREIIQENRILGPASFDSEAQNDDSISEQYPLGSISREPQDLFLQTENKLKVDSNEQIRKSLDMTLDGNGHNSNHQDLDSIQLCIEPQTDDSDEPASSELVTMDLSVPSQQELENLELSLDRNEQHCDEKVMENSHLNNMQTNELHEECDKLLIEESPIRETLEADREVELQGASKVELTLPTEMVEVETFPLRPSIKETDHLHVTSTDIGNVNGILNKLETKQVQGSSSSLVPDRSISRDSPSDMVTAKNAHGMEIPMSEKDAEVNAKNAEVNGVVLQNREVDTSSNGIELPDSSMMKKENRKFVNDHKDQIALHIDLTLKTADQSEELEGLQVSLC*

Click here to download the sequence:
Link to NCBI Protein BLAST