Transcript Information: S_Transcript_28832.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.723190824065
Replicate 22.9759111496183
Replicate 33.1738662097359
Condition 2: 8 Hour
Replicate 16.6455867499903
Replicate 27.9081883563685
Replicate 35.8494651567158
Condition 3: 24 Hour
Replicate 15.1818095721875
Replicate 24.005696929773
Replicate 34.9270970465808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28832.p1 GENE.S_Transcript_28832~~S_Transcript_28832.p1 ORF type:complete len:215 (+),score=37.98 S_Transcript_28832:264-908(+)
ATGGATGTTCATACAATTTACCCAAAATTCCATTCCTTTTCATCTCACATTTCCAAGTTTCAAGTCACCGCTTTTCTTCCCTACAAACCTAAACCCATTAGCCATGCATCTCCTAAACCATCTTTTCTTCATAATTTCCATTTTTTCAGTTCTTTTCCCTTATACCCAAATCCCATTTTCAAGGTGGAGGTGAATAAGGCAAGGAAAATGGATAATTCGGTTGAGATGTCAAAAGACGAATGTGGTGATTTGCTGGTAGAGGCCTGCCTTACTCGGACTCTTCCGCCTGCGTTGACATTGGAACATGGGCTTGAAGCACTTAAACATGCTGTTGAAGAACTGAAGCTCAATCCTCCTAATTGTACTAGTGGGATGATTAGATTTCAGGTTGCTGTGCCCCCTAGCGCAAATGCATTGAACTGGTTTTGTTGTCAGCCTGAATCATCAGGAGTGTTTCCTCAGTTTTATGTTTCCAAGAAAGTAGAGAGCCCAGCTTGCGAGGCAGCTTTGACAAGTAAAAAATGTGGAATTTTTGGTCTTGGAGTTGCTGTTGACTTCAAGCAGGCTTCTAGTAGCCCTGTGGGATGGAACTCATTTAGGAGGCAAGTAATCACATGCCCCCTGCATTGGAGAACTGCTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28832.p1 GENE.S_Transcript_28832~~S_Transcript_28832.p1 ORF type:complete len:215 (+),score=37.98 S_Transcript_28832:264-908(+)
MDVHTIYPKFHSFSSHISKFQVTAFLPYKPKPISHASPKPSFLHNFHFFSSFPLYPNPIFKVEVNKARKMDNSVEMSKDECGDLLVEACLTRTLPPALTLEHGLEALKHAVEELKLNPPNCTSGMIRFQVAVPPSANALNWFCCQPESSGVFPQFYVSKKVESPACEAALTSKKCGIFGLGVAVDFKQASSSPVGWNSFRRQVITCPLHWRTAI*

Click here to download the sequence:
Link to NCBI Protein BLAST