Transcript Information: S_Transcript_28835.p1


Annotated TAIR IDAT1G68890.1
Annotated Gene Namemagnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25896988-25906553 | Forward length=1715
E-Value7E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.97378825918
Replicate 221.542133756747
Replicate 325.297558344762
Condition 2: 8 Hour
Replicate 130.132336170816
Replicate 239.200230359875
Replicate 335.840805707491
Condition 3: 24 Hour
Replicate 127.708849265355
Replicate 222.530101773537
Replicate 325.445248337905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28835.p1 GENE.S_Transcript_28835~~S_Transcript_28835.p1 ORF type:complete len:339 (+),score=58.90 S_Transcript_28835:264-1280(+)
ATGGATGTTCATACAATTTACCCAAAATTCCATTCCTTTTCATCTCACATTTCCAAGTTTCAAGTCACCGCTTTTCTTCCCTACAAACCTAAACCCATTAGCCATGCATCTCCTAAACCATCTTTTCTTCATAATTTCCATTTTTTCAGTTCTTTTCCCTTATACCCAAATCCCATTTTCAAGGTGGAGGTGAATAAGGCAATGAAAATGGATAATTTGGTTGAAATGTCGAAAGACGAAGTTGGTGATTTGCTGGTAGAGGCCTGCCTTACTCGGACTCTTCCGCCTGCGTTGACATTGGAACATGGGCTTGAAGCACTTAAACATGCTGTTGAAGAACTGAAGCTCAATCCTCCTAATTGTACTAGTGGGATGATTAGATTTCAGGTTGCTGTGCCCCCTAGCGCAAATGCATTGAACTGGTTTTGTTCTCAGCCCACATCGTCAGGAGTGTTTCCTCAGTTTTATGTTTCCAAGAAAGTAGAGAGCCCAGCTTGCGAGGCAGCTTTGACAAGTAAAAAATGTGGAATTTTTGGTCTTGGAGTTGCTGTTGACTTCAAGCAGGCTTCTAGTAGCCCTGTGGGATGGAACTCATTTAGGAGATATCTCTTGGTTGATTCATTCAACATTACAACTTATGGTTTCATTGGTATCAATTATGACGTGCGCTCATCTTTTATGAAGCATGAGACTGGTTCATCTTACTTTGTCATTCCCCAGATTGAACTGAATGAATATGAAGGCTTCTGCTTGTTGGCTGGAACTTTTGTATGGGATGACTCTTCCCTAAGTAACTTTGAGCAAGCTCTTCATTCTTATGAGATATCTCTCGTCCAGGCAAGCAATCACATGCCCCCTGCACTGGAGAACTGCTATATAAACTTAAAAGAGCATGTCATTCGTAACTTCAATATGGCCAAGCAGTCAAAGTTGGAAATGATTTATATGGAAGCCCCATTACTAGGAGATTGTGATAGTGCTGCGGCTTCTAAGGAAATGGTATCTCCTTTTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28835.p1 GENE.S_Transcript_28835~~S_Transcript_28835.p1 ORF type:complete len:339 (+),score=58.90 S_Transcript_28835:264-1280(+)
MDVHTIYPKFHSFSSHISKFQVTAFLPYKPKPISHASPKPSFLHNFHFFSSFPLYPNPIFKVEVNKAMKMDNLVEMSKDEVGDLLVEACLTRTLPPALTLEHGLEALKHAVEELKLNPPNCTSGMIRFQVAVPPSANALNWFCSQPTSSGVFPQFYVSKKVESPACEAALTSKKCGIFGLGVAVDFKQASSSPVGWNSFRRYLLVDSFNITTYGFIGINYDVRSSFMKHETGSSYFVIPQIELNEYEGFCLLAGTFVWDDSSLSNFEQALHSYEISLVQASNHMPPALENCYINLKEHVIRNFNMAKQSKLEMIYMEAPLLGDCDSAAASKEMVSPFS*

Click here to download the sequence:
Link to NCBI Protein BLAST