Transcript Information: S_Transcript_28873.p2


Annotated TAIR IDAT3G18520.2
Annotated Gene Namehistone deacetylase 15
Annotated Gene Symbol(s)HDA15, ATHDA15
Annotation TypeOrtholog
Chromosome Positionchr3:6361605-6365399 | Forward length=564
E-Value1.1E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1434303667895
Replicate 212.492366448113
Replicate 312.03556673402
Condition 2: 8 Hour
Replicate 113.589308225121
Replicate 213.397345058723
Replicate 312.437653880834
Condition 3: 24 Hour
Replicate 110.607976052054
Replicate 29.7006333618531
Replicate 311.715421777424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28873.p2 GENE.S_Transcript_28873~~S_Transcript_28873.p2 ORF type:3prime_partial len:521 (+),score=114.96,Hist_deacetyl|PF00850.15|6.3e-86 S_Transcript_28873:2869-4428(+)
ATGATACCGGAAGCAGTTGATTTGGGTTGTTCAGTGAATAGAATGACAGAAACTTTGTGTCAAATTGGAGTTAATGGTATAGCATGTGAGGACCTTAATGGAAAGCCAGAGAATGTTGCGAGTTCCTGCCATTGTTCTCATTCAAAGAGCAGGGAAGGAAATACATCAGCTATGACGACTGAAGGCATTCCCGTTGCTGAATGCAAAAAGGCAAGGCTCCAGAAAGAGTTAACACTGGAAGATATATACAGCAATCCAGATGACTTGGAGGATGATGAAGACGATAGTGATTGGGAACCCTTTCGGGAGCCTGTGGTGGTTGGAAAGTGGTTTTGTACCAACTGTACAATGGTTAACATTGAAGGTTTTGTCTTATGTGAGTCTTGTAAGGAGCACAAGGAATCTGAAATCCTTAAGCATGGGTTTTTCGCTTCATCGGTGCTACGAGGGGCTGGCGTTACTCAAATTGAGTCAGAAGTAATAGAAAGATATACAGAGTCACTCTCTGATGCTTCAGCTTCTGAATGCTCTACTATCATAGGTTTTGATGAGAGAATGTTATTGCACTCAGAAGTTGTAATGAAGCTACATCCACATCCTGAAAGACCAGACCGTCTTCGAGCAATCGCGGCTAGCCTCTCCACTGCAGGTATATTTCCTGGAAAATGTCGTGCAATTGCCGCAAGAGAAATAACGCAAGAAGAACTCCTTAAGGTACATTCTATGGAGCATATTGAAGCTGTTGAAGTTACTGGACAAATGCTTTCCAGTTACTTCACTCCTGACACATATGCAAATGAACATTCAGCGTGGGCTGCAAGGCTTGCTGCAGGTTTGTGTGCTGATCTTGCGTCAGAAATTTATTCAGGACGTGCGAGAAATGGATTTGCCCTGATTCGCCCCCCTGGTCATCATGCTGGTGTACACCAGTCCATGGGTTTCTGTCTTCACAATAATGCAGCAATTGCTGCATTAGCTGCTCAATTTGCAGGAGCCAAGAAGGTTTTGATTGTGGATTGGGATGTACACCATGGAAATGGTACACAAGAAATTTTTGATAGGAACAAGTCGGTTTTGTACATTTCATTGCATAGACATGAGGGAGGAAAATTTTATCCTGGAACTGGAGCAGCTCATGAGGTTGGTAAGATGGGTGCTGAAGGTTACTGTGTGAATGTACCTTGGAGCCGTGGTGGAGTGGGTGACAATGATTACGTGTTTGCGTTTCAACATGTTGTCCTTCCAATAGCTCGTGAGTTCGCTCCTGATTTCACCATCATATCAGCTGGATTTGATGCAGCAAGAGGAGATCCACTTGGTGGTTGTGATGTGACACCTGCTGGTTATGCATACATGACTGACATGTTGAATACTGTTTCTGGCGGAAAGTTGCTTGTAATACTGGAGGGCGGCTATAACCTGCGGTCTATCTCATCTTCCGCCACAGCTGTAATCAAGGTATTGCTTGGAGAAAAGCCTGTAGACCAATTTAACAATGCTGGACCATCCAGAGCTGGCATGCAAACTGTTTTGGACGTGCTGAAAATTCAGACAAATTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28873.p2 GENE.S_Transcript_28873~~S_Transcript_28873.p2 ORF type:3prime_partial len:521 (+),score=114.96,Hist_deacetyl|PF00850.15|6.3e-86 S_Transcript_28873:2869-4428(+)
MIPEAVDLGCSVNRMTETLCQIGVNGIACEDLNGKPENVASSCHCSHSKSREGNTSAMTTEGIPVAECKKARLQKELTLEDIYSNPDDLEDDEDDSDWEPFREPVVVGKWFCTNCTMVNIEGFVLCESCKEHKESEILKHGFFASSVLRGAGVTQIESEVIERYTESLSDASASECSTIIGFDERMLLHSEVVMKLHPHPERPDRLRAIAASLSTAGIFPGKCRAIAAREITQEELLKVHSMEHIEAVEVTGQMLSSYFTPDTYANEHSAWAARLAAGLCADLASEIYSGRARNGFALIRPPGHHAGVHQSMGFCLHNNAAIAALAAQFAGAKKVLIVDWDVHHGNGTQEIFDRNKSVLYISLHRHEGGKFYPGTGAAHEVGKMGAEGYCVNVPWSRGGVGDNDYVFAFQHVVLPIAREFAPDFTIISAGFDAARGDPLGGCDVTPAGYAYMTDMLNTVSGGKLLVILEGGYNLRSISSSATAVIKVLLGEKPVDQFNNAGPSRAGMQTVLDVLKIQTNF

Click here to download the sequence:
Link to NCBI Protein BLAST