Transcript Information: S_Transcript_288772.p1


Annotated TAIR IDAT5G56500.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22874058-22876966 | Forward length=597
E-Value3.7E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0004887682399
Replicate 20.49765690731236
Replicate 31.664006263182
Condition 2: 8 Hour
Replicate 14.1688732950786
Replicate 27.7376318603566
Replicate 33.2053906172904
Condition 3: 24 Hour
Replicate 11.1497307100313
Replicate 22.3856643764576
Replicate 33.223870337496


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288772.p1 GENE.S_Transcript_288772~~S_Transcript_288772.p1 ORF type:complete len:133 (-),score=21.45,Cpn60_TCP1|PF00118.20|3e-09 S_Transcript_288772:162-560(-)
ATGGCTTCTTCTCCAAACCCTGTTTCCTCAATGTCCCCAACAACATTACCCAGGTTTTCTCATTCTAGATACTCTTCACCAGTTATAGTGAGCACCACTGTAAAGGCCATGGCCAAAGAACTTTACTTTAACCATGATGGTACAGTTACAAAGAAACTTCAGGCAGGGGTGGATTTGGTGGGCGATTTGCTAGGGGTAACATTGGGTCCTAAGGGAAGAAATGTGGTTTTGCCAAACAAGTATGGACCTCCCAGGATTGTCAATGATGGTGAGACTGTTCTCAAGGAGGTACTTTTATTTGGATTCTTAATTACACTTGTTATTCGACTATTAGTCTTAATCCGTATAATATGTGATGTTAAAGAAAGAGATGTGCTGCCTTTTGGTTCAATCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288772.p1 GENE.S_Transcript_288772~~S_Transcript_288772.p1 ORF type:complete len:133 (-),score=21.45,Cpn60_TCP1|PF00118.20|3e-09 S_Transcript_288772:162-560(-)
MASSPNPVSSMSPTTLPRFSHSRYSSPVIVSTTVKAMAKELYFNHDGTVTKKLQAGVDLVGDLLGVTLGPKGRNVVLPNKYGPPRIVNDGETVLKEVLLFGFLITLVIRLLVLIRIICDVKERDVLPFGSIN*

Click here to download the sequence:
Link to NCBI Protein BLAST