Transcript Information: S_Transcript_28881.p1


Annotated TAIR IDAT4G10710.1
Annotated Gene Nameglobal transcription factor C
Annotated Gene Symbol(s)SPT16
Annotation TypeOrtholog
Chromosome Positionchr4:6602226-6605450 | Reverse length=1074
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.416412593224
Replicate 230.034533331598
Replicate 328.690633775337
Condition 2: 8 Hour
Replicate 128.044900096305
Replicate 227.521594930381
Replicate 327.268197502221
Condition 3: 24 Hour
Replicate 129.696676518817
Replicate 226.85447862254
Replicate 323.722998369718


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_28881.p1 GENE.S_Transcript_28881~~S_Transcript_28881.p1 ORF type:complete len:1060 (+),score=262.78,SPT16|PF08644.7|1.4e+03,SPT16|PF08644.7|1.1e-51,SPT16|PF08644.7|5e+03,FACT-Spt16_Nlob|PF14826.2|8.5e-49,Peptidase_M24|PF00557.20|2e-28,Rtt106|PF08512.8|7.3e+03,Rtt106|PF08512.8|1.2e-16 S_Transcript_28881:276-3455(+)
ATGGGGGACAACCGAAACGCGAACGGCCAGAAGTCGGCTGGCGGTGGTGGCGCGTCGAATCAGTACCAGATCAACTTGGATAACTTCACGAAGAGATTACAATCTCTATACAAGAATTGGAAGGAGAATAAGTCCGATTTATGGGGAGATTCCGACGTTTTAGCCATCGCCACACCGCCGCCATCCGACGATTTGAGGTACCTGAAGTCATCGGCGTTGAACATCTGGCTGTTAGGTTACGAGTTCCCCGAAACAATAATGGTTTTCACTCGTAAAAACATCCATTTCCTGTGTAGCGCGAAGAAGGCCTCGCTTCTCGACTCGGTGAAGAAGGCGGCCAAGGAGGCAGTGGGGGTGGAGGTGGTGATGCACGTTAAGGGGAAGGGAGAGGATGGGAGCTCTCAAATGGAGAAGATTCTCGAAACCCTAGGTGAAGGCTCGGTGATTGGGTACTTGTCGAAGGAGGCTCCCGAGGGGAAGCTTCTAGAATTGTGGTCTGAGAAGTTGAAGGGTTGTGGGTTGAAGATGAGTGATGTGACAAACGGGCTGTCGGATTTGTTTGCTGTTAAGGATGCTGGGGAGCTGATGAACTTGAAGAAGGCGGCGTTCTTGGCGTCATCTGCTATGAAGAATTTTGTGGTCCCGAAGCTTGAGAAGGTTATTGATGATGAGAAGAAGGTGCCACATTCGTCCTTGATGGATGATACTGAGAAGGCTATCATGAACCCTTCCAAAGTTCAAGTCAAGTTGAAGGCTGAGAATGTTGATATTTGTTACCCTCCCATTTTTCAGAGTGGTGGGCAGTTTGATTTGAAGCCTAGCGCCACGAGTAATGATGAGCCGCTTTATTATGAGCCTGCTAGTGTCATTATTTGTGCCTTAGGTTCGAGGTATAATAGCTATTGCTCGAATTTAGCTAGGACTTATTTGATTGATGCTAATTCGATGCAGAGTAAGGCGTATGAGGTTCTTCTTAGGGCCCATGAGGCGGCTGTTGGGGCGCTGAAGCCTGGGGATAAGCTTAGTGCTGTTTATCAGGCTGCCCTCGCTGTGGTTGAGAGGGATGCCCCTGAGTTGGTCTCTAATTTGACTAAGACTGCTGGGACTGGTATTGGGCTTGAGTTTCGTGAGTCGGGGTTGAGTTTGAATGCTAAGAATGATAGGGTGTTGAAGCCTGGAATGGTGTTTAATGTTTCTCTTGGGTTTCAGAACTTGCAGACCCAGAATAAGAACCCCAAAAGGCAGAACTTTGCCTTACTTTTGGCAGATACTGTGATTGTTGGGGAGAAACGGCCCGAGGTTATAACTGCTTTGAGCTCTAAGGCTGTTAAAGATGTTGCTTATTCATTCAATGAGGAGGATGAGGAGGAAGAAGTGCCTAAGGCAAAGCCTGAGTTCGGTGCGAATGATTCCTTCCCATCTAAGACTACTCTTCGGTCAGACCATGGTGAGATCAATCGGGAAGAGCTTAGGAGACAGCATCAAGCTGAACTTGCCCGTCAAAAGAACGAAGAAACTGCTCGGCGACTTGCTGGAGGTGTTGGTGCAGGAGAGAATCGTTCAGTATCTAGAACTTCGACAGAGTTGGTGGCATACAAGAATGTCAATGATCTTCCACCTCCAAGGGGTGAGATGATGATACAGGTTGATCAAAAGAATGAGGCTATCCTGTTACCAATCTATGGAAGCATGGTTCCTTTCCACATTGCCACAGTGAAGACAATTACCAGTCAGTCTGATACCAATCGCAATTGCTATGTCAGGATAATTTTCAATGTACCAGGCACACCATTCAATCCACATGACGCCAACTCGTTGAAGAACCAGGGATCCATATATGTGAAGGAAGTGTCATTCCGCTCGAAAGACCCCAGGCATGTGAATGAAGTGGTCGCCCAGATAAAGACACTCCGGCGGCAAGTTGCTGCTAGGGAGTCTGAGAGGGCTGAGAGGGCAACGTTGGTTACTCAGGAGAAACTCATTGTTGCTACCAACAGATCCAAGCCAATTAGACTGTCAGATCTGTGGATCCGTCCTGCCTTTGGTGGCAGGGGAAGAAAGCTACCGGGCACTTTGGAAGCTCATGTGAATGGGTTCCGCTATTCTACCTCTAGGCCGGATGAGCGTGTTGATATCATGTTTGCTAACATTAAACATGCATTCTTCCAGCCTGCAGAAAATGAGATGATAACTCTCCTTCACTTCCACCTTCATAATCACATAATGGTGGGCAACAAGAAGACTAAGGATGTTCAGTTTTATGTTGAAGTGATGGAAGTTGTCCAAACCTTGGGAGGTGGAAGAAGATCTGCATATGACCCGGATGAGATTGAAGAGGAGCAACGGGAAAGAGAGAGGAAAAATAAAATTAACATGGATTTCCAGAACTTTGTCAACAGGGTGAATGACCTTTGGGGAATGCCACAGTTTAAGGACTTTGATCTGGAATTTGATATGCCTCTGAGGGAGCTTGGTTTCCATGGTGTACCTCATAAAGCCTCTGCCTTTATTGTCCCTACTTCAAGCTGTCTCGTTGAGCTGATAGAGACACCTTTCCTTGTGATCACCTTGAGTGAGATTGAGATAGTGAACTTGGAGAGAGTTGGCTTTGGGCAGAAGAACTTTGATATGACGATTGTGTTCAAGGATTTCAAGCGTGATGTGTTCCGAATTGATTCAATACCTACTACTTCTCTAGAGAGCATCAAAGAATGGCTGGACACAACGGACATCAAGTATTATGAGAGCAGATTGAACCTGCATTGGCGTGCTATCCTGAAGACCATCACTGATGACCCACAGAAGTTTATAGATGATGGAGGCTGGGAATTTTTGAACATGGATGCAAGTGATTCTGAATCTGATGGTTCACAGGAGTCCGACCAGGGTTACGAGCCATCTGATGTGGAGGCTGAATCAGAATCAGAAGATGAAGCTTCTGACAGTGAATCCTTGGTGGAATCTGAAGATGACGAGGAAGAAGAGGAGGACGAGGAGTCGGAAGAAGAGAAGGGCAAGACGTGGGAAGAACTGGAGAGAGAAGCAAGCAACGCAGACAGAGAGCGGGGAGATGAATCTGACAGTGAGGAAGAGAGACGTAAAAGAAAGATGAAAGCCTTTGGGAAGTCTCGAGCAGGTCCCAGTAGCAGCAGCTTGCCTAAGCGTCCTAAACTGAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_28881.p1 GENE.S_Transcript_28881~~S_Transcript_28881.p1 ORF type:complete len:1060 (+),score=262.78,SPT16|PF08644.7|1.4e+03,SPT16|PF08644.7|1.1e-51,SPT16|PF08644.7|5e+03,FACT-Spt16_Nlob|PF14826.2|8.5e-49,Peptidase_M24|PF00557.20|2e-28,Rtt106|PF08512.8|7.3e+03,Rtt106|PF08512.8|1.2e-16 S_Transcript_28881:276-3455(+)
MGDNRNANGQKSAGGGGASNQYQINLDNFTKRLQSLYKNWKENKSDLWGDSDVLAIATPPPSDDLRYLKSSALNIWLLGYEFPETIMVFTRKNIHFLCSAKKASLLDSVKKAAKEAVGVEVVMHVKGKGEDGSSQMEKILETLGEGSVIGYLSKEAPEGKLLELWSEKLKGCGLKMSDVTNGLSDLFAVKDAGELMNLKKAAFLASSAMKNFVVPKLEKVIDDEKKVPHSSLMDDTEKAIMNPSKVQVKLKAENVDICYPPIFQSGGQFDLKPSATSNDEPLYYEPASVIICALGSRYNSYCSNLARTYLIDANSMQSKAYEVLLRAHEAAVGALKPGDKLSAVYQAALAVVERDAPELVSNLTKTAGTGIGLEFRESGLSLNAKNDRVLKPGMVFNVSLGFQNLQTQNKNPKRQNFALLLADTVIVGEKRPEVITALSSKAVKDVAYSFNEEDEEEEVPKAKPEFGANDSFPSKTTLRSDHGEINREELRRQHQAELARQKNEETARRLAGGVGAGENRSVSRTSTELVAYKNVNDLPPPRGEMMIQVDQKNEAILLPIYGSMVPFHIATVKTITSQSDTNRNCYVRIIFNVPGTPFNPHDANSLKNQGSIYVKEVSFRSKDPRHVNEVVAQIKTLRRQVAARESERAERATLVTQEKLIVATNRSKPIRLSDLWIRPAFGGRGRKLPGTLEAHVNGFRYSTSRPDERVDIMFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMEVVQTLGGGRRSAYDPDEIEEEQRERERKNKINMDFQNFVNRVNDLWGMPQFKDFDLEFDMPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGFGQKNFDMTIVFKDFKRDVFRIDSIPTTSLESIKEWLDTTDIKYYESRLNLHWRAILKTITDDPQKFIDDGGWEFLNMDASDSESDGSQESDQGYEPSDVEAESESEDEASDSESLVESEDDEEEEEDEESEEEKGKTWEELEREASNADRERGDESDSEEERRKRKMKAFGKSRAGPSSSSLPKRPKLR*

Click here to download the sequence:
Link to NCBI Protein BLAST