Transcript Information: S_Transcript_288819.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29245056302396
Replicate 20.48489647379153
Replicate 30
Condition 2: 8 Hour
Replicate 10.93737979415969
Replicate 21.7209114338251
Replicate 31.1712004178561
Condition 3: 24 Hour
Replicate 10
Replicate 21.2452643723268
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288819.p1 GENE.S_Transcript_288819~~S_Transcript_288819.p1 ORF type:internal len:91 (+),score=8.98,MatE|PF01554.14|2e-08 S_Transcript_288819:1-270(+)
AACATTACAGTTGCCTGTGTGTTGATTTTCGGCCGTAATCTATGGGGATATTGCTATAGCTCGGAAGAAGAGGTTGTTAAATACGTTGGAAAAATGTTGCTTCTTGTTGCAAGTGCACACGTTATTGATGGCGTTCAATCTGTGCTTTCAGGCAGGGCTAGAGGATGTGGATTGCAAAGGATTGGAGCCGTTGTCAATCTAGGAGCTTATTACCTTGTAGGCCTTCCTTGTGCTTTCTTTTTAGCATTTGTGTTTCGCGTTGGTGGCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288819.p1 GENE.S_Transcript_288819~~S_Transcript_288819.p1 ORF type:internal len:91 (+),score=8.98,MatE|PF01554.14|2e-08 S_Transcript_288819:1-270(+)
NITVACVLIFGRNLWGYCYSSEEEVVKYVGKMLLLVASAHVIDGVQSVLSGRARGCGLQRIGAVVNLGAYYLVGLPCAFFLAFVFRVGGE

Click here to download the sequence:
Link to NCBI Protein BLAST