Transcript Information: S_Transcript_288842.p1


Annotated TAIR IDAT5G15280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4962293-4965976 | Forward length=1227
E-Value4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17394118454366
Replicate 20.144201238938
Replicate 30
Condition 2: 8 Hour
Replicate 10.41814490817908
Replicate 20.29244246587878
Replicate 30
Condition 3: 24 Hour
Replicate 10.14277701627839
Replicate 20.14812948742711
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288842.p1 GENE.S_Transcript_288842~~S_Transcript_288842.p1 ORF type:internal len:153 (+),score=32.69,PPR|PF01535.16|0.96,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.67 S_Transcript_288842:2-457(+)
GATGACTTTATTATTGGTTCTAATGCTTCTGTAAATGAATTACTACTCAGCATTTCTCATGTATCCCCTGAAACGTGTCGCAAATTTTTGAGGTTTTCAAGTTTGAACCCCGAACATGTCCTTGAAATTTTGTTGGATTTTCAGTTGGGTGGTGGGAATTTGCTCTTTGATGCTAAAATTGTTAGATCTTTGTGGGAAATATTTAAAAGGGCAGGTGATAAGCATGTGGGTTTTAAGCATATACCTCAATCTTATGAGGTTGTGGCATCAATGCTTGTTGGTTGTGGGATGGTTAGGGAAGTTGAGCTATTGCTATCTTCAATGGAAAGGCAAGGAGTTTTGTTGGTTAGTAATTATATATTCAGTGGTGTAATTGAGTGTTATGCTAATGCTGGTGAATTGGAAAAGGCTCTTTTGATGTATGATAAAATGATGGTGCTATGTCTTGTGCCATCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288842.p1 GENE.S_Transcript_288842~~S_Transcript_288842.p1 ORF type:internal len:153 (+),score=32.69,PPR|PF01535.16|0.96,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.67 S_Transcript_288842:2-457(+)
DDFIIGSNASVNELLLSISHVSPETCRKFLRFSSLNPEHVLEILLDFQLGGGNLLFDAKIVRSLWEIFKRAGDKHVGFKHIPQSYEVVASMLVGCGMVREVELLLSSMERQGVLLVSNYIFSGVIECYANAGELEKALLMYDKMMVLCLVPS

Click here to download the sequence:
Link to NCBI Protein BLAST