Transcript Information: S_Transcript_288989.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11324681376673
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.10732784853241


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_288989.p1 GENE.S_Transcript_288989~~S_Transcript_288989.p1 ORF type:complete len:235 (-),score=19.55,RVT_1|PF00078.23|1.5e-24 S_Transcript_288989:1668-2372(-)
ATGGTGGCTTATCAGACTTTTCACTCTATGCATTGTCATAGTGGCATCAATGGAAGCATGGCTTTGAAACTTGATATGACAAAGGCCTATTATCAATTAGAATGGACTTTCCTTGAAAAAATTATGTTGAAAATGGGGTTTAGAGCCCAATGGGTGGACATGGTAATGAGATGCGTATCCACTGTTTCATACTCTTTCTTGATAAATGGAGAACCGAAGAGCTATTTGAAGCCAACCAGAGGACTCCGCCAAGGAGATCCAATCTCTCCATACCTTTTTTTGCTATGTGCTGAAGGGCTGTCTAGCTTGCTTACTAATGCAGCATCTACAGGTAATTTTGAAGGGCACAAGATATGTGAAGGGGCGCCTATGGTGACAAATTTATTATTTGCCGACGACACCATTATCTTTGCAAGAGCAGATGTGACTCATGCACAAAGAGTTTCCAATATGCTTAGTCTTTATGAGCAAGCCTCGGGTCAGCAGGTTAACAAGACGAAGACCACGGTGTCGTTCAATAAGGGAGTCCCGCACCATACTCGGAATGAAATAACCCAAGCTCTAGGAGTCTCGGAAACCACAAGCCAAGATAAATATCTAGGCCTTCCCACTTACATTGGAAGGTCAAGAAAAAAGGCTTTTCTTCCCATAAAGGATCGTATCCAAGGTAAGCTTCAAAGGTGGATGGAGCAATATCTCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_288989.p1 GENE.S_Transcript_288989~~S_Transcript_288989.p1 ORF type:complete len:235 (-),score=19.55,RVT_1|PF00078.23|1.5e-24 S_Transcript_288989:1668-2372(-)
MVAYQTFHSMHCHSGINGSMALKLDMTKAYYQLEWTFLEKIMLKMGFRAQWVDMVMRCVSTVSYSFLINGEPKSYLKPTRGLRQGDPISPYLFLLCAEGLSSLLTNAASTGNFEGHKICEGAPMVTNLLFADDTIIFARADVTHAQRVSNMLSLYEQASGQQVNKTKTTVSFNKGVPHHTRNEITQALGVSETTSQDKYLGLPTYIGRSRKKAFLPIKDRIQGKLQRWMEQYLS*

Click here to download the sequence:
Link to NCBI Protein BLAST