Transcript Information: S_Transcript_289125.p1


Annotated TAIR IDAT4G05590.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2907176-2908297 | Forward length=146
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2322398900791
Replicate 30.1941340640379
Condition 2: 8 Hour
Replicate 10
Replicate 20.23549314357607
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.71569931293729
Replicate 30.26549520426438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289125.p1 GENE.S_Transcript_289125~~S_Transcript_289125.p1 ORF type:5prime_partial len:95 (+),score=11.05 S_Transcript_289125:2-286(+)
ACCGTTGCTCTCTCCTTCCTTCCAACCCAACTCCCATCAACGTTGTTTTCCTTCAACTCAACCACCAGCGCTCAAGAGCTCTCCTTCGACCTGTCACTGGAAACATCTAATAGCAACACTTCCCAACCTCTCTACTTCTCTCTCTCTGTCGATCTCCCACCCAGATGGTCGATTTCCTTCGACTTCAACATGACAGATCCAGTGAGCTGCATCTGCAAGAAATGTGATACACTTCTTAAACAGTTCACTTTTGGGCACCAACATTTAAATGGGGCATTAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289125.p1 GENE.S_Transcript_289125~~S_Transcript_289125.p1 ORF type:5prime_partial len:95 (+),score=11.05 S_Transcript_289125:2-286(+)
TVALSFLPTQLPSTLFSFNSTTSAQELSFDLSLETSNSNTSQPLYFSLSVDLPPRWSISFDFNMTDPVSCICKKCDTLLKQFTFGHQHLNGALV*

Click here to download the sequence:
Link to NCBI Protein BLAST