Transcript Information: S_Transcript_289649.p1


Annotated TAIR IDAT3G11840.1
Annotated Gene Nameplant U-box 24
Annotated Gene Symbol(s)PUB24
Annotation TypeOrtholog
Chromosome Positionchr3:3736578-3738250 | Reverse length=470
E-Value2.6E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6076027679265
Replicate 20.35260165959499
Replicate 30.75792066096989
Condition 2: 8 Hour
Replicate 10.48688105746879
Replicate 20.25538639999688
Replicate 30.29199791239701
Condition 3: 24 Hour
Replicate 10.099748326441069
Replicate 20.31046317227873
Replicate 30.11516915253478


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289649.p1 GENE.S_Transcript_289649~~S_Transcript_289649.p1 ORF type:complete len:438 (+),score=35.96,U-box|PF04564.11|6.4e-20,zf-Nse|PF11789.4|1.7e-05 S_Transcript_289649:165-1316(+)
ATGGAAGCCCTTTGTCCTGTCACCAAACAGCCTCTTCCTAAGGATTCCGACTTAACACCCAACCACACCCTCCGACGCTTAATTCAGGCGTGGTGCGTGGCCAACGCTAGGCACGGCGTGGACCGCATTCCCACCCCCAAAGCCCCAATCTCCCGGGCCCACATCCTCAAGATCATCCGCGGCCTCAGTGTTCCTACCCTGCAGTCTGCCTCACTGGATCAGCTCCTCGTCCTTGCAACCTCGGACGACCATCTCAAGGACAGGAACATGCTCCGACAGTCCCATGCTCCTAAAGCTATGGTGTCCTTGATCATCAAATGTCATAAGGATAGGAAATCGAGCGGCCTTGAAAAAGCCCTGCGGATCCTCTCCGCAATCTGGTCCCCTGCGTCGCAGGAGATCAAATCCCTCGTCGCAGACAATTACGACTTCATGGACGCCCTCACATGGGTTGTTGCTACAAGTCAAAATGTTGACCACCAAGGCTACACACTAGCCAACCTCGGGATCCTCTTAATAAAGGAATTGGTCAAGGTCGCAAGTCCAAGCCTCGTCGAGAGGCTGAAGCCAGAGTTCTTCAAAGGAGTTGTGGGGATCTTAAAGCAGAGGGGCGGGATCGCCAGCGTGGTGGGCCCCATGAAGGCCGCAATCCGAGTCCTTCTAGAGGTCTGCCAGTACGGAAGAAACAGGCTCAGGATCATTGAGGCTCAAGCCATATTCGAGCTCATCGAGCTCGAAATGGAACTGAGCCTCACCCTGCAGCAGCCAGCAGAGAGGAAGAAATTGAGTGAGTTGGTCTTTTGCTTAATGGGCCAGCTCTGCTCCTGCGCTGATGGGCGGGCCCAGTTCCTGGCCCATGCAGCGGGGATTGCCGTCATGACCAAGAGGCTCTTGAGGGTATCGCCGGCAGTAGATGATCGAGCAGTTCATATATTCGCTCTGATATGCAAATTCTCGGCAACAAACGAGACATTACAGGAAATGCTGAGAGTGGGAGCAGTGTCTAAACTGTGCATGGTGTTACAGGCAGATTGTGCAAAGTATTTGAAGGATAAGGCTAGAGATATTCTAAGGATGCATCCTAATGTTTGGAACAAGTCTCCTTGTATTCAGGTTTACCTTTTGACGAGATATCCTACCTTGCAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289649.p1 GENE.S_Transcript_289649~~S_Transcript_289649.p1 ORF type:complete len:438 (+),score=35.96,U-box|PF04564.11|6.4e-20,zf-Nse|PF11789.4|1.7e-05 S_Transcript_289649:165-1316(+)
MEALCPVTKQPLPKDSDLTPNHTLRRLIQAWCVANARHGVDRIPTPKAPISRAHILKIIRGLSVPTLQSASLDQLLVLATSDDHLKDRNMLRQSHAPKAMVSLIIKCHKDRKSSGLEKALRILSAIWSPASQEIKSLVADNYDFMDALTWVVATSQNVDHQGYTLANLGILLIKELVKVASPSLVERLKPEFFKGVVGILKQRGGIASVVGPMKAAIRVLLEVCQYGRNRLRIIEAQAIFELIELEMELSLTLQQPAERKKLSELVFCLMGQLCSCADGRAQFLAHAAGIAVMTKRLLRVSPAVDDRAVHIFALICKFSATNETLQEMLRVGAVSKLCMVLQADCAKYLKDKARDILRMHPNVWNKSPCIQVYLLTRYPTLQF*

Click here to download the sequence:
Link to NCBI Protein BLAST