Transcript Information: S_Transcript_289668.p1


Annotated TAIR IDAT5G50920.1
Annotated Gene NameCLPC Homologue 1
Annotated Gene Symbol(s)CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1
Annotation TypeOrtholog
Chromosome Positionchr5:20715710-20719800 | Reverse length=929
E-Value3E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.32208451908781
Replicate 30.089745674372752
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.15559012850351
Condition 3: 24 Hour
Replicate 10
Replicate 20.33085856315836
Replicate 30.12273500927064


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289668.p1 GENE.S_Transcript_289668~~S_Transcript_289668.p1 ORF type:internal len:411 (+),score=-29.49,AAA_2|PF07724.10|1.7e+03,AAA_2|PF07724.10|2.5e-41,AAA|PF00004.25|6.8e-05,AAA|PF00004.25|8.4e+02,AAA|PF00004.25|7.4e-06,AAA_5|PF07728.10|6.5e+02,AAA_5|PF07728.10|1.8e-11,Sigma54_activat|PF00158.22|9.6e+02,Sigma54_activat|PF00158.22|1.1e-05,AAA_17|PF13207.2|6e+02,AAA_17|PF13207.2|0.00016 S_Transcript_289668:1-1230(+)
TACCGCGGCGAGTTTGAGGAGCGCCTGAAGAAGCTCATGGACGAGATCAAGCAGAACGACGACATCATCCTCATGATCGATGAGGTGCACACGCTGATCGGCGCGGGCGCCGCTGAGGGCGCGATCGACGCCGCCAACATCCTCAAGCCCGCGCTCGCGCGCGGCGAGCTGCAGTGCATCGGCGCCACGACGCTCGACGAGTACCGGAAGCACATCGAGAAGGACCCCGCCCTCGAGCGGCGCTTCCAGCCCGTGACGGTGCCAGAGCCGTCGGTCGACGAGGCGTACCAGATCCTGCTCGGCCTGCGCGAGCGCTACGAGGCGCACCACAAGCTGCGCTACACCGACGAGTCGCTCGAGGCGGCGGCGAAGTTCAGCAGCCAGTACATCAGCGACCGCTTCCTGCCGGACAAGGCGATCGACCTCATCGACGAGGCCGGCAGCCGCGTGCGCCTGCGGCACGCCGCGCTGCCGGAGGAGGCGAAGGAGGTGGAGAAGGAGCTGCGCAAGATCCAGAAGGAGAAGGACGACTCCGTGCGCGCGCAGGAGTTTGAGAAGGCAGGGGACCTGCGGGACAAGGAGGTGGAGCTGAAGGCGAAGATCGACGCGATCATCGCGGACAAGGCGGCGGAGGCCAAGGCGGAGGAGACGAGCACGGGCGACGCGGGGCCCGTCGTGGAGGACGGCGACATCGCCAAGATCGTGGCGCAGTGGACGGGCATCCCGATCGAGAAGGTGAGCAGCGACGAGACAGACCGGCTCGTCAACATGGAGTCGGTCCTGCACGACCGCGTGATTGGGCAGGACGAGGCGGTCACGGCCATCAGCCGCGCGATCCGGCGGGCGCGCGTCGGGCTGAAGAACCCCGCGCGGCCCATCGCGAGCTTCATCTTCAGCGGCCCCACGGGCGTCGGCAAGAGCGAGCTCGCGAAGACGCTGGCGGCGTACTACTTTGGCAGCGAGGACGCGATGGTGCGGCTCGACATGAGCGAGTACATGGAGCGCCACACGGTGAGCAAGCTCATCGGCTCGCCGCCGGGCTACGTCGGCTACAGCGAGGGCGGCCAGCTCACGGAGGCGGTCCGCCGGCGGCCCTACACCGTCGTGCTCTTCGACGAGATCGAGAAGGCGCACCCCGACGTGTTCAACATGATGCTGCAGATCCTGGAGGACGGCCGCCTCACGGACTCCCGCGGCCGGGTGGTGGACTTCAAGAACACGCTGATCATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289668.p1 GENE.S_Transcript_289668~~S_Transcript_289668.p1 ORF type:internal len:411 (+),score=-29.49,AAA_2|PF07724.10|1.7e+03,AAA_2|PF07724.10|2.5e-41,AAA|PF00004.25|6.8e-05,AAA|PF00004.25|8.4e+02,AAA|PF00004.25|7.4e-06,AAA_5|PF07728.10|6.5e+02,AAA_5|PF07728.10|1.8e-11,Sigma54_activat|PF00158.22|9.6e+02,Sigma54_activat|PF00158.22|1.1e-05,AAA_17|PF13207.2|6e+02,AAA_17|PF13207.2|0.00016 S_Transcript_289668:1-1230(+)
YRGEFEERLKKLMDEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVTVPEPSVDEAYQILLGLRERYEAHHKLRYTDESLEAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLRHAALPEEAKEVEKELRKIQKEKDDSVRAQEFEKAGDLRDKEVELKAKIDAIIADKAAEAKAEETSTGDAGPVVEDGDIAKIVAQWTGIPIEKVSSDETDRLVNMESVLHDRVIGQDEAVTAISRAIRRARVGLKNPARPIASFIFSGPTGVGKSELAKTLAAYYFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSRGRVVDFKNTLII

Click here to download the sequence:
Link to NCBI Protein BLAST