Transcript Information: S_Transcript_289793.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1512102342908
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.48466796175302
Replicate 20.25422555272417
Replicate 30.48445108193139
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 20
Replicate 30.14330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289793.p1 GENE.S_Transcript_289793~~S_Transcript_289793.p1 ORF type:complete len:176 (+),score=27.48,RVT_1|PF00078.23|8.4e-29 S_Transcript_289793:184-711(+)
ATGGTTAAAATTGATGTGAGGAAAGCTTATGATTCAGTATCTTGGGATTTTCTTAAGGCCGCTTTGGACTATTTTGGCTTTCCCAGTGATTTTGTTGAAAGAATTATGGCCTGCTTGTGTTCATCTCAGTTCTCTGTGAACATTAATGGGGGGATGAAGGGGATTTTTAAGGGAGAATATGGATTAAGGCAAGGGGATCCTATATCTCCTTGGTTTTTTGTGTTATGCATGGAGATTTTATCCAGAATGTTAAGGAGGTGTTTTGAGAATAGGGAATTCAGGGCCCATCCTAAATGCATCAGAATGAAATTGAACCACTTGCTATTTGCTGATGATTTATTACTTTTTTCAAGGAGGGATAAGGAGTCTTTGAGGGTTCTACTAGATGTGGTTAGTCATTTTTCATCTATGTCTAGTCTCTATGCCAATGAGACTAAGAGTTGTATATATTTTGAGGGTGTTAATGAGGATAAGAAGGGTAAGATACTTAAGGATATTGGTTTTTATTGCAGGAGATCTACCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289793.p1 GENE.S_Transcript_289793~~S_Transcript_289793.p1 ORF type:complete len:176 (+),score=27.48,RVT_1|PF00078.23|8.4e-29 S_Transcript_289793:184-711(+)
MVKIDVRKAYDSVSWDFLKAALDYFGFPSDFVERIMACLCSSQFSVNINGGMKGIFKGEYGLRQGDPISPWFFVLCMEILSRMLRRCFENREFRAHPKCIRMKLNHLLFADDLLLFSRRDKESLRVLLDVVSHFSSMSSLYANETKSCIYFEGVNEDKKGKILKDIGFYCRRSTF*

Click here to download the sequence:
Link to NCBI Protein BLAST