Transcript Information: S_Transcript_289930.p1


Annotated TAIR IDAT1G67020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25011008-25012987 | Reverse length=659
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.036758288998868
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289930.p1 GENE.S_Transcript_289930~~S_Transcript_289930.p1 ORF type:complete len:724 (-),score=152.93,RVT_1|PF00078.23|1.9e-16,Retrotrans_gag|PF03732.13|4.4e-10,gag-asp_proteas|PF13975.2|1.7e-06,RVP_2|PF08284.7|1.4e-05 S_Transcript_289930:156-2327(-)
ATGGTGACTACTAGAACCACAGTATTGGATGAGGCAACCAGAGACTTCATCTCTCAAACTGTTACAGCAGCCATGGCTGCTGCTTTGGAAACTAATCCTAAATTGATGGAGCTTTCGGGGCAAATTATAGGATTGAGTCTCCAACATCAAGAATTGGCAACACAAGTTACTCAGAACAGAGGTAATCCTTACAATTCTAATTTCCAGAACCAATTGAGTAGAATTTCTAGAGTGGATTTTCCTAAATTCAATGGTGAAGATGTTAAAGGATGGTTGTATAAGTGTCAACAGTTCTTTGAGGTTGATAATGTTGAAGATAATATGAGGGTTAAGATTGCTAGTATTCATTTGGAGAATAAGGCCCTTTTGTGGCACCAAAATTTTATGAAAGGTAGGAGAAATGTATGGCCTGGGTGGGAAATTTATGCAGAGGCTATCTCTGCTAGGTTTGGGGCTACTTATGAAGACCCCATGCCTGAGTTGAAAAATCTGAGGCAAAATGGTACAGTGCAAAGTTACCAAGATGCTTTTGATCTACTTTTAAGCAAGGTAGAATTGAGTGAGGCCCATGCTGTGAGTTTCTTTATTGGAGGATTGCAGGAGGAAATTGAGATGCCAGTGAGGATGTTCAGGCTACGAAATTTAGCTGATGCTTATTGTTTGGCTAAGTTACAGGAGGCCACAAATTTGGCTGTTAAAAAGAGGAATAAGCCCATCCTGCCTACCCCCAAATTACCTCACTCAAATTTCACACCTCAAAAATTTTCTACTGCCCAAACCATCAACAATGCGGATGCACCTTCATCAAGCAATATTGCCAACAACTTACCCAAGAAAAGACTGAGCCAAAAAGAGATTCAAGAAAAAAGGGCTAAGAACCTTTGCTTCTATTGCGACCAATCATACTTCCCTGGTCACAAGTGCACAGGGCAGTTGTTCATATTAGAGGTAGTGGCAGATGATTATGAAGGATTGGAAAGGGGTACCACTGTCATGTCGGAAGAGAATGTTGTTTTGGAGAGTGATTCGGAGCATGCTCCTGAAAAAATACCTCAAATTTCTCTCAATGCCCTCTCTGGTACATCAACTTTCCAAACAATGAAAGTGAAAGGAATAGCCAAGGGGCAGGTTATACACATTTTGGTGGATTCAGGGAGTACACATAATTTCTTGGATCTACAAACAACTAGAAGATTGGGTTGCTCACTGAGGAAGACCTCCCATCTGCAGATTGCAGTGGCTGATGGCAACAATATTTTCACTTCTTTTCAATGCAAGGATTTCTCTTGGTCATTGATGGGAGAAAGCTTTATGACTGATGTCATGATTCTGCCTTTAGGGGGTTGTGATATGGTGCTCGGAGTACAATGGCTAGTCACTTTGGACACCATTAAATGGAACTTTAAAGACTTGAGGATGGAATTTACACACCAAGGCAGAAAGGTGGCTTTGAGGGGCACAACAAAACCATCTGTACAGTGGTCAAGGGATAAAGACACTAATAAGCTAGCTGAGTTGTCCATGATGCTTTGCATTTATCCTGTGGAGGCATCTCATGTTCCTACTTGCTGTATGGCTGAACAGGTAACAAATTCTTCACCTATTACTGATCTGCTTACTCAGTTTGAAGATGTTTTTGTTGTTCCTACTGTTCTACCACCACATAGATCACATGACCACCATATACCTTTAATGCCTGGTACTGCCCCTATCAATATTAGACCATATAGGCATTCCCCTGCTCAAAAGGATGCTATTGAAGCTATGGTCAAAGAGTTATTGGAGTCTGGTGTGATTAGACCTAGTCACAGCCCTTTTTCTTCTCCTGTGGTGATGGTCAAAAAGAAGGATGGCTCATGGAGGATGTGCATTGACTACAGATCCCTTAATAAGCATACTGTGAAGGACAAATTCCCAATTCCTGTCATTGAGGAGCTTATTGATGAATTGTGTGGTGCAACAGTTTTTTCTAAACTGGATTTAAGATCTGGGTATCACCAGATCAGAATGTTTCCAGATGACATTCATAAAACTGCTTTTAAGACCCATGAGGGACACTATGAATTTGTTGTCATGCCTTTTGGCCTTACGAATGCTCCCTCTACATTTCAAGCATTGATGAATGAGGTTTTCAGGCCATTTTTAAGGAAGTTTGTTTTGGTGTTTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289930.p1 GENE.S_Transcript_289930~~S_Transcript_289930.p1 ORF type:complete len:724 (-),score=152.93,RVT_1|PF00078.23|1.9e-16,Retrotrans_gag|PF03732.13|4.4e-10,gag-asp_proteas|PF13975.2|1.7e-06,RVP_2|PF08284.7|1.4e-05 S_Transcript_289930:156-2327(-)
MVTTRTTVLDEATRDFISQTVTAAMAAALETNPKLMELSGQIIGLSLQHQELATQVTQNRGNPYNSNFQNQLSRISRVDFPKFNGEDVKGWLYKCQQFFEVDNVEDNMRVKIASIHLENKALLWHQNFMKGRRNVWPGWEIYAEAISARFGATYEDPMPELKNLRQNGTVQSYQDAFDLLLSKVELSEAHAVSFFIGGLQEEIEMPVRMFRLRNLADAYCLAKLQEATNLAVKKRNKPILPTPKLPHSNFTPQKFSTAQTINNADAPSSSNIANNLPKKRLSQKEIQEKRAKNLCFYCDQSYFPGHKCTGQLFILEVVADDYEGLERGTTVMSEENVVLESDSEHAPEKIPQISLNALSGTSTFQTMKVKGIAKGQVIHILVDSGSTHNFLDLQTTRRLGCSLRKTSHLQIAVADGNNIFTSFQCKDFSWSLMGESFMTDVMILPLGGCDMVLGVQWLVTLDTIKWNFKDLRMEFTHQGRKVALRGTTKPSVQWSRDKDTNKLAELSMMLCIYPVEASHVPTCCMAEQVTNSSPITDLLTQFEDVFVVPTVLPPHRSHDHHIPLMPGTAPINIRPYRHSPAQKDAIEAMVKELLESGVIRPSHSPFSSPVVMVKKKDGSWRMCIDYRSLNKHTVKDKFPIPVIEELIDELCGATVFSKLDLRSGYHQIRMFPDDIHKTAFKTHEGHYEFVVMPFGLTNAPSTFQALMNEVFRPFLRKFVLVFL*

Click here to download the sequence:
Link to NCBI Protein BLAST