Transcript Information: S_Transcript_289940.p1


Annotated TAIR IDAT3G47833.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17648721-17649829 | Forward length=93
E-Value9E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.822247520087
Replicate 240.140042936898
Replicate 339.979092413482
Condition 2: 8 Hour
Replicate 146.778275534356
Replicate 248.063390948574
Replicate 344.556997574284
Condition 3: 24 Hour
Replicate 138.052377693293
Replicate 238.309152470987
Replicate 340.843439649575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_289940.p1 GENE.S_Transcript_289940~~S_Transcript_289940.p1 ORF type:5prime_partial len:155 (-),score=12.74 S_Transcript_289940:196-660(-)
ATCCCAATAATTCATCTCACCATTGTGGTTGGCACACGCACTTACAGTCAGACTCACTCCTTTCTCTTTCCCCTACCCCGATTTTCACCTCTTTCTCTCTCTCCTTGTCTGTCTCTGTGTGTTTCGATCTCAAGACCCAGACTGAAAGTCGCAAAGCCTAATCTAATGGCATCATTTCTCAGTAGCAAAACCTCCCTCTTCTCCCAGCTTCGATCTAATCCTCAGAGAACGCAAAACGTTTCAGCCCAACAGACTCGAGGGTTTCACGTCGACCTTGGAGAGCGCGAGAAAGCTCTGTTGGCAAAGGACCCTGCACTGAGTCGGTTCAAGTCATATAAGAGTGGTGTGAAGCGAATTAAAAGACTTGGCGATGTTCTCACAATTATTGTTGTGGCTGGCTGCTGCTATGAAATCTATGTCAGGGCAACAATGCGAGAGGAAGTGAGGAAACAAGAAAAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_289940.p1 GENE.S_Transcript_289940~~S_Transcript_289940.p1 ORF type:5prime_partial len:155 (-),score=12.74 S_Transcript_289940:196-660(-)
IPIIHLTIVVGTRTYSQTHSFLFPLPRFSPLSLSPCLSLCVSISRPRLKVAKPNLMASFLSSKTSLFSQLRSNPQRTQNVSAQQTRGFHVDLGEREKALLAKDPALSRFKSYKSGVKRIKRLGDVLTIIVVAGCCYEIYVRATMREEVRKQEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST