Transcript Information: S_Transcript_290859.p2


Annotated TAIR IDAT2G40100.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.3
Annotation TypeHomolog
Chromosome Positionchr2:16745884-16747190 | Forward length=276
E-Value8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.090829355751469
Replicate 20.90359547675829
Replicate 30.18883347525871
Condition 2: 8 Hour
Replicate 10.29113160842502
Replicate 20
Replicate 30.14550066624561
Condition 3: 24 Hour
Replicate 10
Replicate 20.23205267825612
Replicate 30.25824618844829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_290859.p2 GENE.S_Transcript_290859~~S_Transcript_290859.p2 ORF type:complete len:293 (+),score=0.47,Chloroa_b-bind|PF00504.17|6.3e-45 S_Transcript_290859:40-918(+)
ATGGCTCCGTTCGGCACCAAGCAGATAAGCAAAGCCAAGGGCAAAGGCAAGGCTGCTTCCAAGCCAGCCTCTCGCAAGGGCTCCAGCAAGAGTGGGGGCGGCCCAGGCAGCCAACTGCGCAAGGCAGCGAACCAAGCGGCATCTGCGGGCCAGCGCCTCGGCGGTGTTGGCTACCGCAAGTATGAGGGCGATGCCTTGTGGCTGCCCAACACGGAGCGACCACCGTGGCTCGATGGCTCCATGCCGGGTGACCGTGGCTTTGATCCGCTAGGCCTGGCCAAGCCCAACGAGTTCTACCAGGTGGAGCTCGACGACCTGGACCAGAACAAGGCGATCAACAAGGCCGGCGGCATCCTCGGCCAGATCAAGGAAGACACGCGGGCGCCCGAGGTGGACACCGAGAACCAGCTCGCGCCTTACTCCAGCGTGTTCTCGCTGCAGCGCTTCCGCGAGTGCGAGCTGATCCACGGCCGGTGGGCGATGCTTGCGTGCCTCGGCTGCATCTGGGCGGAGCTCCAGACTGGCGTCTCCTGGGTCGAGGCTGGCAAGGTGGAGCTCGACGGCGCGCAGTACGCGGGCCTCAGCCTGCCCTTCGACATCTGGCAGCTCATCTGGATCGAGGTGCTCCTCGTCGGCGGCGCCGAGATCTACCGCAACCGGGAGACGGACCTGGAGAAGCGGTGCTACCCCGGGGGGCCCTTTGACCCCCTCAACTTTGCGGAGGGCCGCTCCGCGGACAGGCTGAAGGAGGCAGAGATCAAGCACGGCCGCCTCGCGATGATCGCCTTCCTCGGCTACGGCGTCCAGGCGCTGGCATTCGGCGAGGGGGTGTTGGGCAGCCTCGCAGTGTTCACCAAGGGCTTCGGCAGTCCCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_290859.p2 GENE.S_Transcript_290859~~S_Transcript_290859.p2 ORF type:complete len:293 (+),score=0.47,Chloroa_b-bind|PF00504.17|6.3e-45 S_Transcript_290859:40-918(+)
MAPFGTKQISKAKGKGKAASKPASRKGSSKSGGGPGSQLRKAANQAASAGQRLGGVGYRKYEGDALWLPNTERPPWLDGSMPGDRGFDPLGLAKPNEFYQVELDDLDQNKAINKAGGILGQIKEDTRAPEVDTENQLAPYSSVFSLQRFRECELIHGRWAMLACLGCIWAELQTGVSWVEAGKVELDGAQYAGLSLPFDIWQLIWIEVLLVGGAEIYRNRETDLEKRCYPGGPFDPLNFAEGRSADRLKEAEIKHGRLAMIAFLGYGVQALAFGEGVLGSLAVFTKGFGSPI*

Click here to download the sequence:
Link to NCBI Protein BLAST