Transcript Information: S_Transcript_29178.p1


Annotated TAIR IDAT1G19000.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6561335-6562684 | Reverse length=285
E-Value3.2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1161.28233727278
Replicate 2190.27200072297
Replicate 3201.03890326591
Condition 2: 8 Hour
Replicate 1123.49064676552
Replicate 2134.54842302474
Replicate 3121.39450799149
Condition 3: 24 Hour
Replicate 1164.76619568969
Replicate 2137.18839135044
Replicate 3160.6340133035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29178.p1 GENE.S_Transcript_29178~~S_Transcript_29178.p1 ORF type:complete len:282 (+),score=42.35,Myb_DNA-binding|PF00249.27|7e-11 S_Transcript_29178:258-1103(+)
ATGGATAAGCAAGCGCCGGTCACCGGAGGAGAGTTCATGCTGTTCGGAGTACGCGTGGTGGTTGACTCCATGAGGAAGAGTGTTTCTCTCAACAACCTTTCTCAGTACGAGCATCGCCTCGATTCGTCCTCCTCCAATGATCAAAAGGACAAAGAGAAAGACGTCATCGCTGCTGGTTACGCTTCTGCTGACGACGCCATTCCTCACTCCTCCTCCACCGCCGCCGCCGCCGCCACAGGCTCCGGCGTCAGCCGCGAGCGCAAGCGAGGAGTGCCATGGACGGAGGAAGAGCACAAGCTGTTCTTGATAGGATTGCAGAAGGTAGGAAAAGGAGATTGGAGAGGGATTTCGAGAAACTTCGTTAAGACCAGAACACCAACGCAAGTTGCAAGTCATGCTCAGAAATACTTTCTCCGTCGTAGTAATCTCAATCGCCGCCGTCGTAGATCTAGCCTCTTCGACATCACCACTGATTCGGTGGCAGGAAACTCGTCTAGTGAAGATCAGATGGTGGAGAAAAACAACAATGTCGTCACAACCTCTCAATCACCACCGCCACAACCACCACAACAACAACAAATTTCCGAGATGTCGAGATCATATCAACAACAAAATCATCATCAACCGATCTATCCTGTGGTATCATTCAGCCAAGCTCCTGAACTTCAGAGAAAATCAACGGCGGATTTCGACCTCAACGAGGACTCATTGTCCCTTAACCTTTCTCTCTCCATGTCACCAGCAGATCTGGCTAACTCCTCGTCTAATACTACTACTTCAAGGCATTCAGGTTTTCAGCTTATGCAAGGGTTCAACAATGGCGATAACATTATCAGTGTCGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29178.p1 GENE.S_Transcript_29178~~S_Transcript_29178.p1 ORF type:complete len:282 (+),score=42.35,Myb_DNA-binding|PF00249.27|7e-11 S_Transcript_29178:258-1103(+)
MDKQAPVTGGEFMLFGVRVVVDSMRKSVSLNNLSQYEHRLDSSSSNDQKDKEKDVIAAGYASADDAIPHSSSTAAAAATGSGVSRERKRGVPWTEEEHKLFLIGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVAGNSSSEDQMVEKNNNVVTTSQSPPPQPPQQQQISEMSRSYQQQNHHQPIYPVVSFSQAPELQRKSTADFDLNEDSLSLNLSLSMSPADLANSSSNTTTSRHSGFQLMQGFNNGDNIISVA*

Click here to download the sequence:
Link to NCBI Protein BLAST