Transcript Information: S_Transcript_292219.p1


Annotated TAIR IDAT5G47850.1
Annotated Gene NameCRINKLY4 related 4
Annotated Gene Symbol(s)CCR4
Annotation TypeOrtholog
Chromosome Positionchr5:19378803-19381058 | Reverse length=751
E-Value1.9E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3907929696796
Replicate 20.90713378503732
Replicate 30.5145550449169
Condition 2: 8 Hour
Replicate 10.37577780294508
Replicate 20.75558372792028
Replicate 30.71991849473505
Condition 3: 24 Hour
Replicate 10.76986373535134
Replicate 20.66560386420991
Replicate 30.33333098332753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_292219.p1 GENE.S_Transcript_292219~~S_Transcript_292219.p1 ORF type:complete len:681 (+),score=86.02,Pkinase|PF00069.21|1.2e-42,Pkinase_Tyr|PF07714.13|3.8e-41,RCC1_2|PF13540.2|1.1,RCC1_2|PF13540.2|5.5,RCC1_2|PF13540.2|0.00014,RCC1_2|PF13540.2|0.009,RCC1_2|PF13540.2|3.6,RCC1_2|PF13540.2|7.4e+03 S_Transcript_292219:501-2543(+)
ATGGAATGCTGGAGATTCTCAGCTAATGGTGCAAACATTTCACATAAAAGAATATACAGGGGCCCAGTTTTGGGTGAACTTGAAGCTGGGAATTCCCATGTTTGTGGGCTTGAAAATGGGACTAATAGCCTCAAGTGCTGGCAGTGGAGTCAATGGAATCCAAATAAAGTTTCACATTTTTCCAGCATTGCTGTTGGTCAGGAATTTGTTTGTGGGTTAGATATTAATGGCAAAATTGATTGTTTGGGCAATGATGCTAGTGTTGTTACTGGGAAGAAACCCATTGGAAATTATAGTGTTATTGCAGCTGGGTCACTTCATGCTTGTGCTATATCCTTGAATGGTAGCTTGGATTGTTGGGGAAGTAGTAAAGTGATAGGAAACAAACCAGATGGAGAGTTCATAGATTTAGCCTTGGGAGACAACAAAAGTTGCGCAATACGTGTTAATAAAACAGTAGTTTGTTGGGGGGATGACAAGTTTAGAATACCCACAAGGTTGCAGGAGACTGAGTTCACAGGAATTGTGGCCAAACAAGGAATTTTTTGTGGGGTTCTTTCATCCAATTATTCAGTATTGTGTTGGGGGAATGATATCCTAGATGGGAATTTGGTTGTTTTCAGTAATGTGATGCCAGGAACTTGCACTACTCAATGCCCATCATCATGGTGTGCTTTACCAGGGTATGGTCAGTTTTGTGGTCAAGGACTAATGTTGTGCCAGCCCTGTGCTAGGCAAATAGTGGTTCAAGGAGCACCGTCATCAGCGAGTCCATCTTTGGCTCCATCGATGCAGCCTTCAGGGAGTAGCAAAACATGGAGTGTTAAAATGGTGGTTTTGTTGGTACTAGGATGCTTAGGGTCTGTTTCTTTGATAGCATCAATAGCCTTCTTGGTGTGCCGGTGTCCTGGAAGTAAGGGGAGTAGCCGAGTGCATGATTCAGGGCCTATGGAGCTGGGTGAGAATCCTCAAGGAACGCGAACTGAAGTAGACAATCAACCACAGCCAGTAGCACCACCTATGCTACAGAAGCGGTTGAGCCACATGTATAGTATAGGGAATGGAGGCAGTCTAGAGGAGTTTGCATTGGAAGTCCTAATCAAAGTCACCAACAACTTCTCGGAGGAGCATAGGATAGGTATAGGCAGTTTTGGGTCAGTCTATCATGCCACATTACAAGACGGGAGAGAGGTGGCAATCAAGCGAGCAGAAGTTCACGTATCACCAAATAGGGTGGGAATAAGGCGCCGCCAAGAGGAGAAGGATACAGCATTCATGGCAGAACTAGAGTTTTTATCAAGGCTTAACCACAAGCACCTCGTTAGGTTGATTGGGTTTTATGAGGACGCAAATGAAAGGATTCTAGTGTACGAGTTCATGAGCAATGGAACCCTTCACGACCACCTTCACAAGCTAAAGGGATCTTCTCCTCTCGCAACATGGCCAGCTCGGCTCAAGGTGGCGTTAGATGCAGCTAGGGGGATCCAGTACCTACATGAATTTGCAGTGCCCCCTATCATACATCGTGATATCAAACCTTCAAATATATTGCTTGACGATGATTGGACAGCCAAGGTGTCGGATTTTGGGTTGTCCTTGATGGGTCCCCAGGAAGGGGAGACCCATATATCCCTTCGGGCCGCGGGCACCTTTGGATACGTAGATCCTGAGTATTACAGACTACACCGGTTAACAACAAAGAGCGATGTTTATAGCTTTGGTGTCGTACTAATGGAGCTTCTAAGCGGGCACAAGGCCATCCACACCAACGAGGAAGGACTGCCAAGAAACGTGGTTGATTTTCTGGTGCCATATATTACAAGAGACGAAATCCATAGAGTGTTGGACCCTTATGTGCCACCTCCAACTCTGATCGAGATAGAGGCAGTAGCCTATTTGGGGTACCTAGCTGTAGATTGCGTGAGCCTAGAAGGCCGAAACCGGCCTTCAATGTCTGAGGTAGTTAGTTGTTTGGAAAGAGCCTTGGCAGCCTGCTATGCATTACCAGCTATGTCGCGCTCCTCGACTGAGTCCTCTCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_292219.p1 GENE.S_Transcript_292219~~S_Transcript_292219.p1 ORF type:complete len:681 (+),score=86.02,Pkinase|PF00069.21|1.2e-42,Pkinase_Tyr|PF07714.13|3.8e-41,RCC1_2|PF13540.2|1.1,RCC1_2|PF13540.2|5.5,RCC1_2|PF13540.2|0.00014,RCC1_2|PF13540.2|0.009,RCC1_2|PF13540.2|3.6,RCC1_2|PF13540.2|7.4e+03 S_Transcript_292219:501-2543(+)
MECWRFSANGANISHKRIYRGPVLGELEAGNSHVCGLENGTNSLKCWQWSQWNPNKVSHFSSIAVGQEFVCGLDINGKIDCLGNDASVVTGKKPIGNYSVIAAGSLHACAISLNGSLDCWGSSKVIGNKPDGEFIDLALGDNKSCAIRVNKTVVCWGDDKFRIPTRLQETEFTGIVAKQGIFCGVLSSNYSVLCWGNDILDGNLVVFSNVMPGTCTTQCPSSWCALPGYGQFCGQGLMLCQPCARQIVVQGAPSSASPSLAPSMQPSGSSKTWSVKMVVLLVLGCLGSVSLIASIAFLVCRCPGSKGSSRVHDSGPMELGENPQGTRTEVDNQPQPVAPPMLQKRLSHMYSIGNGGSLEEFALEVLIKVTNNFSEEHRIGIGSFGSVYHATLQDGREVAIKRAEVHVSPNRVGIRRRQEEKDTAFMAELEFLSRLNHKHLVRLIGFYEDANERILVYEFMSNGTLHDHLHKLKGSSPLATWPARLKVALDAARGIQYLHEFAVPPIIHRDIKPSNILLDDDWTAKVSDFGLSLMGPQEGETHISLRAAGTFGYVDPEYYRLHRLTTKSDVYSFGVVLMELLSGHKAIHTNEEGLPRNVVDFLVPYITRDEIHRVLDPYVPPPTLIEIEAVAYLGYLAVDCVSLEGRNRPSMSEVVSCLERALAACYALPAMSRSSTESSR*

Click here to download the sequence:
Link to NCBI Protein BLAST