Transcript Information: S_Transcript_292350.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value2.6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92836050820397
Replicate 20.7696321938668
Replicate 30
Condition 2: 8 Hour
Replicate 10.24796965485038
Replicate 20.78041332464163
Replicate 30.24785869308118
Condition 3: 24 Hour
Replicate 10
Replicate 21.3176634637411
Replicate 30.293279586106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_292350.p1 GENE.S_Transcript_292350~~S_Transcript_292350.p1 ORF type:internal len:86 (+),score=8.29 S_Transcript_292350:2-256(+)
TCATGTATAGCCTTGGCCGGTGTAGCAACGGAGTACCTGTTATACGGATATGCAGAAGGAGGCTTGGCTGATATCAACAAGGTTTGCTCATTTCACTTGTACGTTTACAATGATATTGCTCTCATCTGCTCCAATATTCTAACTTTGGAAAGTTTTTGGCGTGCTGAGGAAGCTGGATGTATTGCTCAAGAGCTTAGGCTTCACACAGAAGAAAACAGATTCACAGGTGAGATGGGCAGTTTTAAACACTATTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_292350.p1 GENE.S_Transcript_292350~~S_Transcript_292350.p1 ORF type:internal len:86 (+),score=8.29 S_Transcript_292350:2-256(+)
SCIALAGVATEYLLYGYAEGGLADINKVCSFHLYVYNDIALICSNILTLESFWRAEEAGCIAQELRLHTEENRFTGEMGSFKHYS

Click here to download the sequence:
Link to NCBI Protein BLAST