Transcript Information: S_Transcript_29257.p1


Annotated TAIR IDAT5G57900.1
Annotated Gene NameSKP1 interacting partner 1
Annotated Gene Symbol(s)SKIP1
Annotation TypeOrtholog
Chromosome Positionchr5:23449916-23450915 | Reverse length=300
E-Value6.1E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5034986941277
Replicate 25.1787255231466
Replicate 34.7441121758458
Condition 2: 8 Hour
Replicate 18.7770095195917
Replicate 28.5602893508922
Replicate 38.910161378288
Condition 3: 24 Hour
Replicate 16.4621520293719
Replicate 26.12141534538
Replicate 35.1092887380139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29257.p1 GENE.S_Transcript_29257~~S_Transcript_29257.p1 ORF type:complete len:311 (+),score=53.47,LRR_4|PF12799.3|1.7e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|0.17,F-box|PF00646.29|7e-06 S_Transcript_29257:116-1048(+)
ATGAATGAACAAGAAAAGGCATCAACCGAGTTAACCCCGAGGTGTTCAGACTGGGCCGAGTTAACTCACGAGTGTTTAATGAACATCTTATCACGTCTTCCATTAGAGGACAGGTGGAAGGGAGCTATGATGGTTTGCAAGCCATGGTTACAAGCATGCAAGGACCCTTCCCTCAATACTGTCCTTGATCTCGAAACCCACTTTGACTCGTCCTCTGAGTCGACTCACTGGTGGTCTTCCGAGTTTGAGAGGAGAATTGATGCCATTCTCCGATCCGTGGCTGAGTCGAGTCATGGGACTTTGATTGAGATCAGGGTCAGGCACTGCTCTAATCAAGCTCTCATCTTTGCTGCTCAAAGATGCCCTAAACTTCAGGTTCTTTCAATTAAAAGCAGCCAGAGTGTCACTGATGCAGCCATGGCTGAGGTAGCAAAGAGCTGTCCTGCACTGAAAGAACTTGACATCAGCTTCTGCCATGAGATCTCTCATGAATCTCTGACTTTGATTGGCCGGAATTGTCCCGACCTTAAAGTACTTAGACGCAACTTCATGAATTGGTTAGACTCTTCCCAGCATAAAGGTGTTGTTCCGAATGAATACCTTGATGCATTGCCCCAAGATGGTGATTCTGAAGCTGCTGCCATTGGCAAATACATGCCTGGTCTGGATCACCTCGAGCTTCGATTCTCTAAGTTATCAGGCAAAGGCCTTGCCTTGATATCTCAAGGCTGTTTAAACCTGGAATATTTGGACCTATCTGGGTGTGCAAACTTGACTAGTCGTGATATTATCAATGCATCCTCGAATTTGAAGAACCTTAAGACGATCAAGAAGCCGAACTTCTACATCCCGAGGTCTGTCTATCACACTGAAAGGTATGGTCATTGGAGGTTGTATGATGAACGGTTTCAGACTGATGTCTTTAGGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29257.p1 GENE.S_Transcript_29257~~S_Transcript_29257.p1 ORF type:complete len:311 (+),score=53.47,LRR_4|PF12799.3|1.7e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|0.17,F-box|PF00646.29|7e-06 S_Transcript_29257:116-1048(+)
MNEQEKASTELTPRCSDWAELTHECLMNILSRLPLEDRWKGAMMVCKPWLQACKDPSLNTVLDLETHFDSSSESTHWWSSEFERRIDAILRSVAESSHGTLIEIRVRHCSNQALIFAAQRCPKLQVLSIKSSQSVTDAAMAEVAKSCPALKELDISFCHEISHESLTLIGRNCPDLKVLRRNFMNWLDSSQHKGVVPNEYLDALPQDGDSEAAAIGKYMPGLDHLELRFSKLSGKGLALISQGCLNLEYLDLSGCANLTSRDIINASSNLKNLKTIKKPNFYIPRSVYHTERYGHWRLYDERFQTDVFRI*

Click here to download the sequence:
Link to NCBI Protein BLAST