Transcript Information: S_Transcript_292687.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.30906362778454
Replicate 20
Replicate 30.46338799141264
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_292687.p1 GENE.S_Transcript_292687~~S_Transcript_292687.p1 ORF type:5prime_partial len:138 (+),score=16.55,RVT_1|PF00078.23|4.3e-19 S_Transcript_292687:2-415(+)
GAGTATCGTGGTTTTCTTGATCTGCTTATAAGATGGGTTATGACATGTATCACCACTTATAGGTTCTCTGTGAGTCTCAATAGGGTTTCCAAGGGTTACTTTGAAGGGAGGTGTAGTGTAAGACAGGGAGATCCTTTGTCTCCTTATATTTTTGTCCTATGTATGGAGGGGCTATCAAGAATGCTTAGGGTTGCTGGCAACACAAAGGAGTTCTCATTTCATCCAAAGACTGTGAGGGTTAGACTAAATCATATAATTTTTGCTGATGATTTATTCATTTTTGCCAGAGGTGATGTGCCTTCTGTGGAGTCTGCTCTAAAGTGTCTTACTACTTTTTCCTGCATGTCTGGTCTTCATATCAATCCTGCTAAGTCTGAAATTTATATGGGAGGTATTGCCTCGAATGTTCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_292687.p1 GENE.S_Transcript_292687~~S_Transcript_292687.p1 ORF type:5prime_partial len:138 (+),score=16.55,RVT_1|PF00078.23|4.3e-19 S_Transcript_292687:2-415(+)
EYRGFLDLLIRWVMTCITTYRFSVSLNRVSKGYFEGRCSVRQGDPLSPYIFVLCMEGLSRMLRVAGNTKEFSFHPKTVRVRLNHIIFADDLFIFARGDVPSVESALKCLTTFSCMSGLHINPAKSEIYMGGIASNVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST