Transcript Information: S_Transcript_29271.p1


Annotated TAIR IDAT5G04280.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1192461-1195413 | Forward length=310
E-Value1.6E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.293804331567
Replicate 238.661753487934
Replicate 331.624378174701
Condition 2: 8 Hour
Replicate 134.695540986182
Replicate 231.839558879109
Replicate 331.338973438045
Condition 3: 24 Hour
Replicate 143.347370688232
Replicate 242.059487314099
Replicate 343.486283457097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29271.p1 GENE.S_Transcript_29271~~S_Transcript_29271.p1 ORF type:complete len:319 (+),score=56.51,RRM_1|PF00076.18|8.6e-22,RRM_6|PF14259.2|8e-12,zf-CCHC|PF00098.19|2.2e-08,RRM_5|PF13893.2|6.3e-06 S_Transcript_29271:129-959(+)
ATGGCTGCAAGAGAAGTGTACCGAATTTTCGTGGGAGGGTTAGGTTGGAACACTTCTCAGCGTCACTTAGAAGATGCCTTCTCTCGTTGTGGCAAAATCCTTGATTGTCTGGTCATGTCAGATAGGGAGACTGGTCGTCCTCGTGGATTTGGGTTCATAACATTTGCTGACCGCAGAGCTATGGAAGATGCAATAAGGAATATGGATGGTAGAGAGTTGGATGGCCGCGTTATCTCAGTGAACAAGGCAGAGCCAAGATTGGGAGCTGAAGATCCATACGATGTTTATGATATAGATCGTAGATCAGGTGGTAGGGATAGATACAGAGGAGGAGATAGACTTGATAGATACAGAGGAGGAGATAGACTTGTAGAACGATCGGATGAATGCTTTAAGTGTGGTCGTCTGGGGCACTGGGCCAGGGATTGCCCTTCTGGTGGTGGTGGGAGGTATTCTTCACAATCTGAATATGGTAGGGCTGCTCTCCATGGAGATCGCTTTGGGGGAGATCGTGACTATGATCGTTATTATGATCGATCTGGTGGGGGACGCTATGAGAGTAGAGAACGCTTGGATATCAGAGATGGTTATGGAGCTCATGATCGCTTCAGCAGTGAAAGGTACCAACCTATTGGTGATCGCTTTGGAGGTGATAGATATACTGATCGCTATCCCCAAAATGGATATAGCCGAGAAAGAGTCTATGAAAGGGATGGAGGCCTTAGAGGTGGTGATAGGTTTGGAGCTGGTGGACCAGCCCGCTATGATAAAGGGAGCTATAGAGACAGGGCACACCCTTATGATGCTCCTCGGAGAGGTGGTCGACGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29271.p1 GENE.S_Transcript_29271~~S_Transcript_29271.p1 ORF type:complete len:319 (+),score=56.51,RRM_1|PF00076.18|8.6e-22,RRM_6|PF14259.2|8e-12,zf-CCHC|PF00098.19|2.2e-08,RRM_5|PF13893.2|6.3e-06 S_Transcript_29271:129-959(+)
MAAREVYRIFVGGLGWNTSQRHLEDAFSRCGKILDCLVMSDRETGRPRGFGFITFADRRAMEDAIRNMDGRELDGRVISVNKAEPRLGAEDPYDVYDIDRRSGGRDRYRGGDRLDRYRGGDRLVERSDECFKCGRLGHWARDCPSGGGGRYSSQSEYGRAALHGDRFGGDRDYDRYYDRSGGGRYESRERLDIRDGYGAHDRFSSERYQPIGDRFGGDRYTDRYPQNGYSRERVYERDGGLRGGDRFGAGGPARYDKGSYRDRAHPYDAPRRGGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST