Transcript Information: S_Transcript_29280.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86033409165454
Replicate 20.6656876159595
Replicate 31.2321655573095
Condition 2: 8 Hour
Replicate 11.286877001896
Replicate 20.96430382067787
Replicate 31.3781798020462
Condition 3: 24 Hour
Replicate 11.5065436890065
Replicate 20.68382190101048
Replicate 31.1415149407488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29280.p1 GENE.S_Transcript_29280~~S_Transcript_29280.p1 ORF type:complete len:464 (+),score=129.95 S_Transcript_29280:111-1394(+)
ATGGCGTCAATTTCAGCGCCACCTCAGAACCCTAATCCCAATACTAAGCCCAATCCCCCTTCTAAGGTCAGAGAAGAAGGAGAGCTCACTTCATCTGACGACGATGTCGATGCACCCCCTGCTGCTTCAGTTGCTCCATCAACTTGTATTTCTGCTCCTCCATCCAGTTCTGTTCCAAATGCTTCAGTGAAATCTAGTGTGCAAGTTGTTAACTCAGGAAAGTCAGTTTCTGCAAATCTTCCTCCTAGAACTGCTGAAACTCAGTCCCAGACACCTGGGTATCACAAAGGCTTTAGTAAGAACCAAGTATTGTTGAAGCCAAGTAATCCTGGATGGTGTGCTCCTGGTGCGGATAATAATCTTGTGATTAGTTTCTCAGATGATGATGATAGTGGTAGTGATGGGGAAGAAAGAAAACAAAATAAAGGTCAAAGAACTGATGGGCACCTTCGAGTGGTGAAAAGCAATCGAAAACCACCTGCCTTGCCCAAAGTGAAATTGGACTTTGCAGGAAGAACTGCAAAAAAGGTAGCACAAAAGAAGGTGTCATTAAGTCGTAAATTTGCCTCATCAGCTGCCAAGACCCATGGTCCCAGTGTAAGAAGTGGTGGATCATCCTTAGCTGAGCAGCGATCTAGCTTGATGAGTACCAATGTGGCTGGTAGGATTTCATCAATCCAAGATCGTGGAAGCAAAAGTGTGGATCTGAGCAGTAGCAAACTTCAGGACTTACGCCAACAGATTGCCATGCGTGAGAACGAAATGAAACGTAAAATAATGCAGAAAAATAAGGAAAATATCCCAGATGCTTGCAGAGATGTCAAAGTTATGGGCCAGAACAAACTGCCATCTAAGAAAAGCAGGGCACTTCCTTCTGATCTACATACCGAGCTTGAAGAGCCTGATAGAAAACGCCTAAAAAATGCTCAATATGGTTCTGAACAACCAAGTTCCAGTGGCCAGCATTTGAAACTTGCAGAACCAATGTCAGTGCGGAATGAGACACTGAGAGGACATTTAGTTGATCATGCCAATTTTGACACAGATAATTTGCAGAGGGAACTGATGCCATTGTCTGATGGAAGACAGTTTTCATCCACATCACAATCTCATTCAGCTGCTATTGTCGCTGTCAGTTGCAGCCTCTCAGACTGGATTTCTAGACCTAATGAGGCTTTGACTATGCCAAAGCAAAGTGCATTAGTAACAAATTCCGCCTTTTCTGATACGTTAGATAGATCAGTAAGTTGCTATGTGCTACCATTCAATGATCAAAATATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29280.p1 GENE.S_Transcript_29280~~S_Transcript_29280.p1 ORF type:complete len:464 (+),score=129.95 S_Transcript_29280:111-1394(+)
MASISAPPQNPNPNTKPNPPSKVREEGELTSSDDDVDAPPAASVAPSTCISAPPSSSVPNASVKSSVQVVNSGKSVSANLPPRTAETQSQTPGYHKGFSKNQVLLKPSNPGWCAPGADNNLVISFSDDDDSGSDGEERKQNKGQRTDGHLRVVKSNRKPPALPKVKLDFAGRTAKKVAQKKVSLSRKFASSAAKTHGPSVRSGGSSLAEQRSSLMSTNVAGRISSIQDRGSKSVDLSSSKLQDLRQQIAMRENEMKRKIMQKNKENIPDACRDVKVMGQNKLPSKKSRALPSDLHTELEEPDRKRLKNAQYGSEQPSSSGQHLKLAEPMSVRNETLRGHLVDHANFDTDNLQRELMPLSDGRQFSSTSQSHSAAIVAVSCSLSDWISRPNEALTMPKQSALVTNSAFSDTLDRSVSCYVLPFNDQNI*

Click here to download the sequence:
Link to NCBI Protein BLAST