Transcript Information: S_Transcript_29281.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value1.1E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.374931751706
Replicate 220.674569090975
Replicate 320.349176218085
Condition 2: 8 Hour
Replicate 126.872387910859
Replicate 227.273545813599
Replicate 324.716803065551
Condition 3: 24 Hour
Replicate 123.194848200687
Replicate 222.25637226711
Replicate 320.092617396885


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29281.p1 GENE.S_Transcript_29281~~S_Transcript_29281.p1 ORF type:complete len:1780 (+),score=439.03,zf-C3H1|PF10650.5|9.8e-11 S_Transcript_29281:111-5342(+)
ATGGCGTCAATTTCAGCGCCACCTCAGAACCCTAATCCCAATACTAAGCCCAATCCCCCTTCTAAGGTCAGAGAAGAAGGAGAGCTCACTTCATCTGACGACGATGTCGATGCACCCCCTGCTGCTTCAGTTGCTCCATCAACTTGTATTTCTGCTCCTCCATCCAGTTCTGTTCCAAATGCTTCAGTGAAATCTAGTGTGCAAGTTGTTAACTCAGGAAAGTCAGTTTCTGCAAATCTTCCTCCTAGAACTGCTGAAACTCAGTCCCAGACACCTGGGTATCACAAAGGCTTTAGTAAGAACCAAGTATTGTTGAAGCCAAGTAATCCTGGATGGTGTGCTCCTGGTGCGGATAATAATCTTGTGATTAGTTTCTCAGATGATGATGATAGTGGTAGTGATGGGGAAGAAAGAAAACAAAAGAAAGGTCAAAGAACTGATGGACTCCTGCAAGCAGTAAAAAGCAATCGAAAACCACCTGCTTTGCCCAATGTGAAATTGGACCTTGCAGGAAGAACTGCAAAAAAGGTAGCACAAAAGAAGGTGTCATTAAGTCGTAAATTTGCCTCATCAGCTGCCAAGACCCATGGTCCCAGTGTAAGAAGTGGTGGATCATCCTTAGCTGAGCAGCGATCTAGCTTGATGAGTACCAATGTGGCTGGTAGGATTTCATCAATCCAAGATCGTGGAAGCAAAAGTGTGGATCTGAGCAGTAGCAAACTTCAGGACTTACGCCAACAGATTGCCATGCGTGAGAACGAACTGAAACGTAAAATAGTGCAGAAAAATAAGGAAAATATCTCAGATGCTTGCAGAGATGTCAATGTTATGGGCCAGAACAAACTGCCATCTAAGAAAAGCAGGGCACTTCCTTCTGATCTACATACCGAGCTTGAAGAGCCTGATAGAAAACGCCTAAAAAATGCTCAATATGGTTCTGAACAACCAAGTTCCAGTGGCCAGCATTTGAAACTTGCAGAACCAATGTCAGTGCGGAATGAGACACTGAGAGGACATTTAGTTGATCATGCCAATTTTGACACAGATAATTTGCAGAGGGAACTGATGCCATTGTCTGATGGAAGACAGTTTTCATCCACATCACAATCTCATTCAGCTGCTATTGTCGCTGTCAGTTGCAGCCTCTCAGACTGGATTTCTAGACCTAATGAGGCTTTGACTATGCCAAAGCAAAGTGCATTAGTAACAAATTCCGCCTTTTCTGATACGTTAGATAAATCAATGACAAAGAACCCAGGAGTGGTATACGAGAAGCAGCCCTCAAGTTCTGATGCGAACAAAGTTATTCATGGGAGCAACATGATCAAGGTCAATGATCATTGTGATGTTATGTCTGCACGTGAGAAATTCAAGTCTGCATCTGACTGCTGCCTGCAGGCTTGCCCTTTGCAAGTATCAGATAGCAAGTTTGAGAGTCCTGATGCATCTCCAGACAACACTAGTCTCTTACGTTCTCTGGGTAGGTCTACAGTCTCGAGGCGTAGTGATGTGGATTTAATTTCACTATTTGAAAATGAGGAGTTGCATGATAAGGAGCTGGAAGAAGCTCAAGAGCAAAGGCGAAAATGTGAAATTGAAGAAAGAAATGCTCTTAATGCTTATCGTAGAGCACAAAGGTCATTAGCTGAGGCTAATGCTCGATGCACGTATCTCTATCGCAAGAGGGAAATGTATTCAGCTCAGCTTCGTTCCTTAGTGATGGAGGAATCCAGTTTATTATGGTCTTCTCAGCATAGACAAACTGGTGATGCATGGAATTTATCGAACAATGTCTCTGAAGTTAATTTAGAATTAATTCCATCATCAAGCCGTCAATTTCAAGCTGAAGTTGAAGCTGGAAACCAATTGGGTTATGATTCAAATGTCCAAAGTGCAGATGGTGATGCACACTACAGGTCTTCTGGGAACGAGGATGGACACAATTTTGGCTCTGAAGCTTGCAGTGAACCTGATGCTAGTACATCTCAGCTAAATAATTCTGATGCTAATGGTGTTCATTCACGATGCAGTAATCAAAATTTATCTCCAGATGATGACGATGAGACATTTTCTTTGGATCATGAAGCTGGGCATGCCAATGTGATGACTCTGCGAGGGGAGGTCAACACTAAAAAAGATGAAATGAACATGGGTACAAAATTTTTAACTGATGGGTCTCGGGATCCTTTAGTTCTTGAAGCATATTTGAGGTCCAAATTGTTTTCACGGCTAGGAGTGATTAGTTCTTCAAAGCAAGGTGGCACTTACAGTGATTCAGCAGTAGGAAAAGTTTCTGATGAAGATGTTGCAGGACCACAAACACAGGTAGTCATGGAAAGTGTTTCACCTTCTGATCACGAGGTCTTGAATGACGATCACGGAGATGGCCCCAAGGAACCTGAAGGCAGCATATTTAAGGCACCTTTAAATTCTAAAAACCTACTACATGTTGAAGAGCATTCTCTAAATAATTCACCTATCCCTACTTTAGCTCCTGAAGGCAGCAGCTTTCACATGGTAGATATGACTTCATCACCAATTATTCAATCATCTTCTATCTTTAGGAGTGCAATGAAGGCTGCAGGTCCAGTCAGCTTGGACAGTATGCAGGTTAGGGAACAGCATTATGGTTCTCCAGATATGTGCACTGATAATGGTTCACTTGTTAATTGTAGTCAAGATAAGTTGACCTTGAGTGTGGTGAGCGCTGCTGTGGAGGTTGCCCATTGTGTTAGCTTTGATAAAATTGATTCGTACAATTGCAAGTCTGCAATTGATCCATTTTGGCCTCTATGCATGTACGAGCTTAGAGGAAGATGCAACGATGATGAATGCCCTTGGCAGCATGTGAAAGATTACTCGAGGAATATTATCCAGCTCGAAAGTTCTGATAGTGCTGATTTGCAGACTGGATCCTCATCTCCATGTGGGAAGCAGAGGGCCTGTGCAGAACGTTCTAATGTCTTGATTCCCCCAAGATATTTAGTTTGCTTGGATAGTCTGAAAGCTGATTCTTATGGTTCTCTTCAAGCTCGTCAGCTTGCATTATCTCTGAGAAATGTTTTCAGTAACTCTTTGGCTGTTTCGAGTTCACTCTTAAAGCATCTTCCTTCAGATGAACCATATTTGCATGGAAATGATGGCTGTGTTGAGTCTTATGGTGGCAGTGGACAGTCTTTGTATTTTCGAAAAAGAAATGGCACTGGGAATCCCCTCCAGAATGGTTCAGCCAATAATGACCACTGTCTGGAAATGGCTCTGCTTGTATTGAATCAGGAGATTAGCAAAATTGAGGGTATTAAAAAGGCTCTTGTGATACTTTCTCGGGCTCTTGAAGCTGATCCTGCATCATTACATCTCTGGATTGTTTACCTGCTCCTTTATTATTCGACAAAGAGCTCAGACAGTGAGCTCAGCAAAAAAGCTGCAGTTGGTGAAGATTTTTTCTCTTGTGCTGTCGGGCACCATGAGCAATCATATGAATTGTGGCTCTTGTACATCAACAGTCGTAGAAGACTAAATGATCGCTTGGCTGCTTACGAAAGGGCAATTTCCCGCTTGTGCCACCATGCATCCCACATTGATGGAAACATGATGCATCACAGTGCTGCCATCTTGGACCTGTTTCTGCAGATGATGCATTGTTTGTGCATGTCAGGAAATGTTCCAAAGGCAGTCCAGAGAATCTGTGGACTCGTTCTCGCTGATAGAGATTGCGATGAGTCTCATTCTCTCTTGCTTTCTGATATTCTTCAATGCTTAACGATATCTGACAAATGTATCTTCTGGGTTTGTTGTGTGTACTTAGTGATCTACAGGAAACTGCCTGATGCAATGGTGCAGCAGTTTGAATTTGAGAAAGATATGTCTATAATGGAGTGGCCCTCTGTCCATTTAACACTTGAAAAAAAGCAGCAAGTGTCCAAGCTGATGGAAATGGCTATAGATTCTGTTGGATTGCATATCGACAACAAATCCCATGAGGATGAAGGTAGTACTGCCAAATCAGCTTACCTGATTGCAGTGAACCACATTAAGCTTATGGCAGCAATAGATGGTGAAGAAAGCTATACAAAGTTTCTTGAGAAGTATAAGAACTTGTATCCATCTTGTTTAGAACTTGTTCTATTGTCAGCAAGAGCTCATTGTGTCGGTGAAAGTGCAAATTTTGAAGGGTTTGAAGCAGCTATAAGTAATTGGTCAAAAGAGATTCCTGGGATTCAGTGCATCTGGAACCAATTTGTGGAATATGTTTTGGAGAATGGAAAACCCTGTCAGGCAAAAGAAATATTGGATAAGTGGTTTAACTTAGTGTGGAAGTGTCAATTTCATCACAACCAGTTGATTGATGGCAAGCATGAAGACATCCAGAGCAGTCCTGTAGATCTGTCAGGGTCGGATTTTAATGCTCTGCTTTCATCATCTAACAAAATTGATGCTGTGTTTGCACTGCTCAATCTCTCTCTATATAAAATGTTCCATGATGACCCATTTGAAGCTCAGTTGGCAATTGACAAAGCTCTGAGAGTTGCTGATCCTGATGTATTCAGACATTGTGTCAGGGAGCATGCTGTGTTTTTGTTCAACAATTCATCTCAGTTGAGAAAGGACATCTCTGTTCATGGGTTGCTGGACATTCTAAAGGCTTATATGAGTCACGCATGGGCTATTCCTGCTCGAGATCCATTGACCAGAATGTTCGTTAAGGACATCCAAAAGCCGAGATTGAGGCAGCTTGTGATTAACATCTTAAATCCGATTTCAACTGATACTTGCCTGGTCAATTCATTTCTTGATGTCTGGTTTGGCTCATCCTTCTTGCTTCAAAAGTCGATTGAGCTAAAAGATTTAGTGGACTTTGTGGAAGCGATTCTGGAAGTCTCACCTGCCAACTATCAGCTTGTGATCTCCGTCTGTAGGTTTCTCTGCCAAGACACTGTTGCCTGCAATACTAAATCAGCCAGTGTCTTGTTCTGGGCAAGCTCATCACTGGTTAACACACTCTATCATGCTGTCCCCGTTCCTCCAGAGTACGTATGGACAGAAGCTGCAGATTTGTTGCAAAGACTAACAAATGTACGGGAAATTTCAGAGAGCTTCCATCAAAGGGCTCTATCAGTATATCCGTTCTCCATCAAGTTGTGGAAGTCCTTCCTTCACCTGTCAGTGAGCACCGACAAGAGGAAGAGTATTGTCGAAGCAGCAAAAGACAAGGGTATACAGCTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29281.p1 GENE.S_Transcript_29281~~S_Transcript_29281.p1 ORF type:complete len:1780 (+),score=439.03,zf-C3H1|PF10650.5|9.8e-11 S_Transcript_29281:111-5342(+)
MASISAPPQNPNPNTKPNPPSKVREEGELTSSDDDVDAPPAASVAPSTCISAPPSSSVPNASVKSSVQVVNSGKSVSANLPPRTAETQSQTPGYHKGFSKNQVLLKPSNPGWCAPGADNNLVISFSDDDDSGSDGEERKQKKGQRTDGLLQAVKSNRKPPALPNVKLDLAGRTAKKVAQKKVSLSRKFASSAAKTHGPSVRSGGSSLAEQRSSLMSTNVAGRISSIQDRGSKSVDLSSSKLQDLRQQIAMRENELKRKIVQKNKENISDACRDVNVMGQNKLPSKKSRALPSDLHTELEEPDRKRLKNAQYGSEQPSSSGQHLKLAEPMSVRNETLRGHLVDHANFDTDNLQRELMPLSDGRQFSSTSQSHSAAIVAVSCSLSDWISRPNEALTMPKQSALVTNSAFSDTLDKSMTKNPGVVYEKQPSSSDANKVIHGSNMIKVNDHCDVMSAREKFKSASDCCLQACPLQVSDSKFESPDASPDNTSLLRSLGRSTVSRRSDVDLISLFENEELHDKELEEAQEQRRKCEIEERNALNAYRRAQRSLAEANARCTYLYRKREMYSAQLRSLVMEESSLLWSSQHRQTGDAWNLSNNVSEVNLELIPSSSRQFQAEVEAGNQLGYDSNVQSADGDAHYRSSGNEDGHNFGSEACSEPDASTSQLNNSDANGVHSRCSNQNLSPDDDDETFSLDHEAGHANVMTLRGEVNTKKDEMNMGTKFLTDGSRDPLVLEAYLRSKLFSRLGVISSSKQGGTYSDSAVGKVSDEDVAGPQTQVVMESVSPSDHEVLNDDHGDGPKEPEGSIFKAPLNSKNLLHVEEHSLNNSPIPTLAPEGSSFHMVDMTSSPIIQSSSIFRSAMKAAGPVSLDSMQVREQHYGSPDMCTDNGSLVNCSQDKLTLSVVSAAVEVAHCVSFDKIDSYNCKSAIDPFWPLCMYELRGRCNDDECPWQHVKDYSRNIIQLESSDSADLQTGSSSPCGKQRACAERSNVLIPPRYLVCLDSLKADSYGSLQARQLALSLRNVFSNSLAVSSSLLKHLPSDEPYLHGNDGCVESYGGSGQSLYFRKRNGTGNPLQNGSANNDHCLEMALLVLNQEISKIEGIKKALVILSRALEADPASLHLWIVYLLLYYSTKSSDSELSKKAAVGEDFFSCAVGHHEQSYELWLLYINSRRRLNDRLAAYERAISRLCHHASHIDGNMMHHSAAILDLFLQMMHCLCMSGNVPKAVQRICGLVLADRDCDESHSLLLSDILQCLTISDKCIFWVCCVYLVIYRKLPDAMVQQFEFEKDMSIMEWPSVHLTLEKKQQVSKLMEMAIDSVGLHIDNKSHEDEGSTAKSAYLIAVNHIKLMAAIDGEESYTKFLEKYKNLYPSCLELVLLSARAHCVGESANFEGFEAAISNWSKEIPGIQCIWNQFVEYVLENGKPCQAKEILDKWFNLVWKCQFHHNQLIDGKHEDIQSSPVDLSGSDFNALLSSSNKIDAVFALLNLSLYKMFHDDPFEAQLAIDKALRVADPDVFRHCVREHAVFLFNNSSQLRKDISVHGLLDILKAYMSHAWAIPARDPLTRMFVKDIQKPRLRQLVINILNPISTDTCLVNSFLDVWFGSSFLLQKSIELKDLVDFVEAILEVSPANYQLVISVCRFLCQDTVACNTKSASVLFWASSSLVNTLYHAVPVPPEYVWTEAADLLQRLTNVREISESFHQRALSVYPFSIKLWKSFLHLSVSTDKRKSIVEAAKDKGIQLD*

Click here to download the sequence:
Link to NCBI Protein BLAST