Transcript Information: S_Transcript_292944.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeOrtholog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value2.5E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.505400301933
Replicate 28.7025447699086
Replicate 35.1229822454446
Condition 2: 8 Hour
Replicate 17.5823610016473
Replicate 27.4572828799089
Replicate 310.776345178074
Condition 3: 24 Hour
Replicate 15.8253022641585
Replicate 24.1550321223303
Replicate 36.0252661634444


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_292944.p1 GENE.S_Transcript_292944~~S_Transcript_292944.p1 ORF type:3prime_partial len:180 (-),score=21.94,MS_channel|PF00924.14|1e-22 S_Transcript_292944:3-539(-)
ATGGGTTTTCAATTTGCTGGCAAGGCTATCTATACAGCTGTTTGGGTGGCATCAGTTTCACTGTTCATGGAATTGCTGGGGTTCTCTACCCAAAAATGGCTAACTGCTGGAGGTCTCGGGACAGTATTGCTCACACTTGCTGGTCGTGAGATATTCACGAACTTTCTGTCAAGTGTGATGATTCATGCAACACGGCCATTTGTGCTGAATGAATGGATTCAGACAAAAGTTGAAGGCTACGAAGTGTCCGGTACTGTTGAGCATGTTGGTTGGTGGTCACCAACAATAATCAGAGGGGATGACCGTGAAGCAATTTATATTCCAAACCACAAGTTCACAGTTAATGTTGTCAGAAATCTGAGCCAGAAAACTCATTGGCGCATTAAGACCCATCTTGCCATTAGTCACTTGGATGTCAACAAGATTAATGTAAGGATAAACTTGATTAATGCTTACTGGTCTACTTTGTGTGTCAGTCAATATTTAATCTCTGTTGGTCATGCTCCCAACAAAAGTTTGTGTGATACCTGTACTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_292944.p1 GENE.S_Transcript_292944~~S_Transcript_292944.p1 ORF type:3prime_partial len:180 (-),score=21.94,MS_channel|PF00924.14|1e-22 S_Transcript_292944:3-539(-)
MGFQFAGKAIYTAVWVASVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKVEGYEVSGTVEHVGWWSPTIIRGDDREAIYIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINVRINLINAYWSTLCVSQYLISVGHAPNKSLCDTCTA

Click here to download the sequence:
Link to NCBI Protein BLAST