Transcript Information: S_Transcript_293048.p1


Annotated TAIR IDAT1G09910.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3220151-3224451 | Reverse length=675
E-Value2.5E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31309413217859
Replicate 20.77868669026523
Replicate 30.43394673137884
Condition 2: 8 Hour
Replicate 10.37633041736117
Replicate 20.5263964385818
Replicate 30
Condition 3: 24 Hour
Replicate 10.12849931465055
Replicate 20.39994961605319
Replicate 30.89018980253351


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293048.p1 GENE.S_Transcript_293048~~S_Transcript_293048.p1 ORF type:3prime_partial len:170 (+),score=27.69,Rhamnogal_lyase|PF06045.7|1.1e-68 S_Transcript_293048:227-733(+)
ATGTCATTTCCGGGGGTCCAACTACAGATCCAGGATCATTATGTTGTGATCGATAATGGCATACTCCGAATCAAGATATTGAATCCAGAAGGGATTATCACAAACATACAGTTCAATGGGATCGATAACTTGCTCGAGGAAAAAAAGGATGAAGATGATCGAGGGTATTGGGATCTCTACTGGAGTGAAGCTGGATCAACTGGAACAACGGGATTTTATGATAGGATCAAAGGAACTAGTTGTAAAGTTATTGTAGAAGATGAAGAAATGGTGGAGGTTTCGTTCACCAGGACCTGGGACTCCTCCCTAAAAGGCAAGCTTGTGCCATTGAATATTGACACAAGGTTCATTGTACTCCGGGGTTCATCAGGATTTTACTCCTATGCCATTTATGAGAAGTTGAAGGACTGGCCTGGATTCAATCTTCCTCAAGTTAGGATAGTTTACACTCTTAACAAAGACTTGTTTCATTACATGGTTGTAGCTGATAATAGGCAAAGGAAAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293048.p1 GENE.S_Transcript_293048~~S_Transcript_293048.p1 ORF type:3prime_partial len:170 (+),score=27.69,Rhamnogal_lyase|PF06045.7|1.1e-68 S_Transcript_293048:227-733(+)
MSFPGVQLQIQDHYVVIDNGILRIKILNPEGIITNIQFNGIDNLLEEKKDEDDRGYWDLYWSEAGSTGTTGFYDRIKGTSCKVIVEDEEMVEVSFTRTWDSSLKGKLVPLNIDTRFIVLRGSSGFYSYAIYEKLKDWPGFNLPQVRIVYTLNKDLFHYMVVADNRQRKM

Click here to download the sequence:
Link to NCBI Protein BLAST