Transcript Information: S_Transcript_293063.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15987528664866
Replicate 30
Condition 2: 8 Hour
Replicate 10.4635954416768
Replicate 20.32422969043082
Replicate 30
Condition 3: 24 Hour
Replicate 10.63318502871287
Replicate 20.16423051866918
Replicate 30.5483053131547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293063.p1 GENE.S_Transcript_293063~~S_Transcript_293063.p1 ORF type:3prime_partial len:138 (+),score=11.10,gag_pre-integrs|PF13976.2|1e-10 S_Transcript_293063:84-494(+)
ATGAAGAAGACTCTCTTGTCAGTCTCACAACTTACATCTTCGAGCAACTATGTGGTCTTTAGCCCAGATGATGTTAAGGTGTACCGGAAGTTGAAGCCGATTGGAGCACCACTCATGAAAGAGCGACGATTAGACTTTATCTACGTGATATCGGCACAGGAGGCCTACATAGATAAGACAAGGAGGAATGAGACGGTATATTTATGGCATGCAAGGCTAGGGCATGTCAGCTATCACATGCTACAAGCCATGATGAAAAAGTCATCACTCAATGGTCTACCTCGGATGGACATACGAAGTGATGTAGTATGCGCTGGCTATCATCATGGCAAAGCACATCAATTGCCACATAAGGAGTTGAAGTACCGAGCCAAGAGACCACTAGAGCTGATACATTCAAATGTCTTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293063.p1 GENE.S_Transcript_293063~~S_Transcript_293063.p1 ORF type:3prime_partial len:138 (+),score=11.10,gag_pre-integrs|PF13976.2|1e-10 S_Transcript_293063:84-494(+)
MKKTLLSVSQLTSSSNYVVFSPDDVKVYRKLKPIGAPLMKERRLDFIYVISAQEAYIDKTRRNETVYLWHARLGHVSYHMLQAMMKKSSLNGLPRMDIRSDVVCAGYHHGKAHQLPHKELKYRAKRPLELIHSNVFD

Click here to download the sequence:
Link to NCBI Protein BLAST