Transcript Information: S_Transcript_293376.p1


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value1.8E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9632541894805
Replicate 23.6168507471336
Replicate 32.7210594221706
Condition 2: 8 Hour
Replicate 10.87399140643988
Replicate 21.4670064681788
Replicate 31.7472006233591
Condition 3: 24 Hour
Replicate 11.9696206425946
Replicate 22.7865342102066
Replicate 32.0673806889439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293376.p1 GENE.S_Transcript_293376~~S_Transcript_293376.p1 ORF type:5prime_partial len:122 (+),score=19.68,XendoU|PF09412.6|3.9e-40 S_Transcript_293376:1-366(+)
GGAGAAATCAAGAGCCGCGGGGAACAAGAAGTTTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAATGGTGGCATTAACTATCAAGGTTACATCTTGCCTCGCAGACATCAGGAATACATTCCAGATGCTGAAACACAACTACTCACAGTTCAGTTTGAGTGGAAAGGAATCCTGAAAGCTTTGTCAAGCATTTTCATAGGAGTAAGTCCGGAGTTCGAAATAGCCCTCTATACATTGTGTTTCTTTGCAGGTGAGGAGGATAACCGCATTCAAGTTGGTCCATACCCTGTTAATATCAAGTGCTATCATATGGGAGACAAAATTGGCTCTGCCTTCCCAATTGCTGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293376.p1 GENE.S_Transcript_293376~~S_Transcript_293376.p1 ORF type:5prime_partial len:122 (+),score=19.68,XendoU|PF09412.6|3.9e-40 S_Transcript_293376:1-366(+)
GEIKSRGEQEVSGFHNWLQFYLEEANGGINYQGYILPRRHQEYIPDAETQLLTVQFEWKGILKALSSIFIGVSPEFEIALYTLCFFAGEEDNRIQVGPYPVNIKCYHMGDKIGSAFPIAES*

Click here to download the sequence:
Link to NCBI Protein BLAST