Transcript Information: S_Transcript_293381.p1


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value2.5E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.995744571271
Replicate 214.790422398245
Replicate 311.706413772441
Condition 2: 8 Hour
Replicate 128.924638537047
Replicate 225.760012798973
Replicate 329.766228169985
Condition 3: 24 Hour
Replicate 113.379382984217
Replicate 213.477144077694
Replicate 312.751456748244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293381.p1 GENE.S_Transcript_293381~~S_Transcript_293381.p1 ORF type:complete len:449 (-),score=90.82,XendoU|PF09412.6|1.4e-94 S_Transcript_293381:55-1401(-)
ATGGAGGGCTTAATCAAGGGTTTGGTGGACGTGGCTATTGGCCACAATGGCAGGGATAATGACGACGACCACAACAATCAATTCCACCTCAATTCTGAGTCACTTGAAGAACGTTCTAGATCCACCTGGGCAGAGGTGGTTTCTGGAGATCAAGATAACGACGATCCAGATAGAAATCGATATGCTGATGATCGAAGACGTAATCTCCCTAACAGAGTGGGTTATGGAGATGGTGATGCTGATCCTGATCAGTATTCAGAATTCAGTGAATCGAGGCCTAGTTCTCGCCCTCATCATCAGCCTATGCATGGAAATTATCAACCGGATGAAGACTGTGAAAGGCATAAATATAGCCAAAACCAAACGGAAGTAGGGGAAGCCACTGATGGTTGGCAAACTGCCGGCAAGAAGCATCACAAGCAACCACAGAAGATACATATGGACCATTGGAATTCGTACAAAAGACCTCCCAGTGAGCAGGAATATTCTGAGGAACTCAGTCATGTTGCTGAACTGGAGCCATCTGAAGCGGAGCTTGCTGACTATAAAAGTGCCTGTGCAAAGCTTTGGGAACTAGATTTCAACCGCTTGGTTCCTGGTAAGGATTATGAAATTAATGTTGGTGAGGGCAAGAGGGTCCATGACAGGGGAGATATGGCAGATGAAAATCTCTTTACCTGGGTCAGTGAAGATGTACTCAGAAGGCCTACTTTTTCTCGTTTCTGTGCCCTCCTGGACAATTACAACCCCAATCAAGGATGTAAGGAGAATGTGACAGCTAATGAAAGACAAGAACAAGCTGCCTTCATAGAAGAGATTAGTAGAACTGCGCCTATCAAGTACCTTTACAAGTATCTATCTTGCAACAGAATTTTCACAGAGAATTACGAGGAATTCAGGGGTATGTTGACAGACCTCTGGTTCACTCTTTATGGTCGTGGTGGTTCCTCTGGCTCATCTTCTTCTTTTGAGCATATTTTTGTTGGCGAAATCAAGAGTCGCGGGGAACAAGAAGTGTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAGGGTAATGCTGACTATCAAGGTTACATCTTGCCTCGCAGACGTGGGGAATTTCCGGACTCTGAATCACAGTTGCTCACTGTTCAGTTTGAGTGGCATGGAGTCCTGAAAAATATCTCAAGCATGTTCATGGGAGTAAGCCCTGAGTTTGAATTAGCCCTCTATACACTGTGTTTCTTTGCAGGCGGGGACGACAACCACATTGAAGTTGGTCCATATCCAGTTAATATCAAGTGCTATCATCTGGGAAACAAAATTGGTTCTGCCTTCCCAATGGCAGAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293381.p1 GENE.S_Transcript_293381~~S_Transcript_293381.p1 ORF type:complete len:449 (-),score=90.82,XendoU|PF09412.6|1.4e-94 S_Transcript_293381:55-1401(-)
MEGLIKGLVDVAIGHNGRDNDDDHNNQFHLNSESLEERSRSTWAEVVSGDQDNDDPDRNRYADDRRRNLPNRVGYGDGDADPDQYSEFSESRPSSRPHHQPMHGNYQPDEDCERHKYSQNQTEVGEATDGWQTAGKKHHKQPQKIHMDHWNSYKRPPSEQEYSEELSHVAELEPSEAELADYKSACAKLWELDFNRLVPGKDYEINVGEGKRVHDRGDMADENLFTWVSEDVLRRPTFSRFCALLDNYNPNQGCKENVTANERQEQAAFIEEISRTAPIKYLYKYLSCNRIFTENYEEFRGMLTDLWFTLYGRGGSSGSSSSFEHIFVGEIKSRGEQEVSGFHNWLQFYLEEAKGNADYQGYILPRRRGEFPDSESQLLTVQFEWHGVLKNISSMFMGVSPEFELALYTLCFFAGGDDNHIEVGPYPVNIKCYHLGNKIGSAFPMAEC*

Click here to download the sequence:
Link to NCBI Protein BLAST