Transcript Information: S_Transcript_293392.p1


Annotated TAIR IDAT1G64100.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23791585-23793641 | Forward length=666
E-Value9E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67091599752556
Replicate 21.8540159292029
Replicate 30.92988585295465
Condition 2: 8 Hour
Replicate 10.71681984259271
Replicate 20.75199491225972
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 10.55071134850237
Replicate 20.19045219812057
Replicate 30.63584985895251


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293392.p1 GENE.S_Transcript_293392~~S_Transcript_293392.p1 ORF type:5prime_partial len:119 (+),score=14.81,PPR_2|PF13041.2|7.7e-10,PPR_2|PF13041.2|8.9e-15,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|0.014,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-06,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.087 S_Transcript_293392:1-357(+)
CTCTGCCAGAACGCACAGCTTGATGAGGCAATGAACGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTAATCTCATCATCTACAATATCTTAATCGACAGTCTTTGTGAATCCAGTTTCCTCAAAGACGCATTGAATGTCTTCTACAGTCTTCCATCAAAGGGTTTGCACCCAGATCATCGTACATACAATATAATGATCAAAGGATTCTGCAAGAAAGGGCTACCTGATGAGGAAATGAGCTTTCAAAGGAGATGGAGAACAATGGGTGCTTACCAGATGATTGCACCTACAACACAATTATTCGAGGATGCCTTTCTGCTAATGATATCAGGTAGGCCTTGGAGCTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293392.p1 GENE.S_Transcript_293392~~S_Transcript_293392.p1 ORF type:5prime_partial len:119 (+),score=14.81,PPR_2|PF13041.2|7.7e-10,PPR_2|PF13041.2|8.9e-15,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|0.014,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-06,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|0.087 S_Transcript_293392:1-357(+)
LCQNAQLDEAMNVLREMNSKGVRPNLIIYNILIDSLCESSFLKDALNVFYSLPSKGLHPDHRTYNIMIKGFCKKGLPDEEMSFQRRWRTMGAYQMIAPTTQLFEDAFLLMISGRPWSL*

Click here to download the sequence:
Link to NCBI Protein BLAST