Transcript Information: S_Transcript_293393.p1


Annotated TAIR IDAT1G64100.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23791585-23793641 | Forward length=666
E-Value9E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35017106888395
Replicate 20.58059972519776
Replicate 30.72800274014213
Condition 2: 8 Hour
Replicate 10.84179172304472
Replicate 22.0605650062906
Replicate 31.9633017530904
Condition 3: 24 Hour
Replicate 10.43114901626173
Replicate 20.5964160941144
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293393.p1 GENE.S_Transcript_293393~~S_Transcript_293393.p1 ORF type:5prime_partial len:152 (+),score=24.14,PPR_2|PF13041.2|4.6e-06,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|3.4e-17,PPR_2|PF13041.2|9.7e-08,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|2.5e-10,PPR_1|PF12854.3|5.5e-15,PPR_1|PF12854.3|7e-06,PPR|PF01535.16|85,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|8.3e-11,PPR|PF01535.16|1.2e-05,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|8.5e-06,PPR_3|PF13812.2|0.0063 S_Transcript_293393:3-458(+)
GCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCGCCCTGATCTCATCATTTACAATATCTTAATTGACGGTCTTTGTGAGGCTGGGTTTCTTGAAGACGCATTAGATGCCTTCTCCAGTCTCCCATCTGGTTTGCGGCCAGATAATCATACATACACAATACTCATAAAAGGATTCTGCAAGAAAGGGCTACTAGATGAGGCAAATGAGCTTTTAAAGGAGATGGAGAATAATGGATGCTCACTAGATGATTGCACCTACAACACAATTATTCGGGGATGCCTTTCTGCGAATGATATCATGAAGGCCTTGGAGCTTGTGAGTATTATGAGGAGCAAAGGATATGCGGCAGATAACCACACTACGTCCTTACTTGCGGACTTGCTATCTACTAATAATGATATTAGTGATGCCTATAGAGAATTGCTGCAAACTTTTTTTGCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293393.p1 GENE.S_Transcript_293393~~S_Transcript_293393.p1 ORF type:5prime_partial len:152 (+),score=24.14,PPR_2|PF13041.2|4.6e-06,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|3.4e-17,PPR_2|PF13041.2|9.7e-08,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|2.5e-10,PPR_1|PF12854.3|5.5e-15,PPR_1|PF12854.3|7e-06,PPR|PF01535.16|85,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|8.3e-11,PPR|PF01535.16|1.2e-05,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|8.5e-06,PPR_3|PF13812.2|0.0063 S_Transcript_293393:3-458(+)
AMEFLREMNGKGVRPDLIIYNILIDGLCEAGFLEDALDAFSSLPSGLRPDNHTYTILIKGFCKKGLLDEANELLKEMENNGCSLDDCTYNTIIRGCLSANDIMKALELVSIMRSKGYAADNHTTSLLADLLSTNNDISDAYRELLQTFFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST