Transcript Information: S_Transcript_293394.p1


Annotated TAIR IDAT1G64100.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23791585-23793641 | Forward length=666
E-Value6E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.13809783110942
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15569163213035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293394.p1 GENE.S_Transcript_293394~~S_Transcript_293394.p1 ORF type:5prime_partial len:162 (+),score=18.13,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|8.1e-17,PPR_2|PF13041.2|1.1e-07,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|1.8e-15,PPR_1|PF12854.3|7.7e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.6e-11,PPR|PF01535.16|1.3e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|6.6e-06,PPR_3|PF13812.2|0.007,MRP-S27|PF10037.5|0.2,MRP-S27|PF10037.5|42,MRP-S27|PF10037.5|0.0021 S_Transcript_293394:1-486(+)
CTCTGCCAGAACGCACAGCTTGATGAGGCAATGAACGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTAATCTCATCATCTACAATATCTTAATCGACAGTCTTTGTGAATCCAGTTTCCTCAAAGACGCATTGAATGTCTTCTCCAGTCTCCCATCAAAGGGTTTGCACCCAAATAATCGTACATACAATATAATGATCAAAGGATTCTGCAAGAAAGGGCTACTAGATGAGGCAAATGAGCTTTTAAAGGAGATGGAGAATAATGGATGCTCACTAGATGATTGCACCTACAACACAATTATTCGGGGATGCCTTTCTGCGAATGATATCATGAAGGCCTTGGAGCTTGTGAGTATTATGAGGAGCAAAGGATATGCGGCAGATAACCACACTACGTCCTTACTTGCGGACTTGCTATCTACTAATAATGATATTAGTGATGCCTATAGAGAATTGCTGCAAACTTTTTTTGCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293394.p1 GENE.S_Transcript_293394~~S_Transcript_293394.p1 ORF type:5prime_partial len:162 (+),score=18.13,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|8.1e-17,PPR_2|PF13041.2|1.1e-07,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|1.8e-15,PPR_1|PF12854.3|7.7e-06,PPR|PF01535.16|0.022,PPR|PF01535.16|0.00024,PPR|PF01535.16|1.6e-11,PPR|PF01535.16|1.3e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|6.6e-06,PPR_3|PF13812.2|0.007,MRP-S27|PF10037.5|0.2,MRP-S27|PF10037.5|42,MRP-S27|PF10037.5|0.0021 S_Transcript_293394:1-486(+)
LCQNAQLDEAMNVLREMNSKGVRPNLIIYNILIDSLCESSFLKDALNVFSSLPSKGLHPNNRTYNIMIKGFCKKGLLDEANELLKEMENNGCSLDDCTYNTIIRGCLSANDIMKALELVSIMRSKGYAADNHTTSLLADLLSTNNDISDAYRELLQTFFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST