Transcript Information: S_Transcript_293486.p1


Annotated TAIR IDAT2G37680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15803500-15805515 | Reverse length=215
E-Value1.8E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.873265713762
Replicate 215.495261503185
Replicate 315.011529370373
Condition 2: 8 Hour
Replicate 119.63919666415
Replicate 220.18669133073
Replicate 317.350108515682
Condition 3: 24 Hour
Replicate 119.914405414681
Replicate 214.441591562603
Replicate 317.59677516636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293486.p1 GENE.S_Transcript_293486~~S_Transcript_293486.p1 ORF type:complete len:215 (-),score=37.32,Vac_ImportDeg|PF09783.5|1.9e-49 S_Transcript_293486:526-1170(-)
ATGCCAGTGAGAGTTTCTGAAGCCTCTGTGCCTTCCCAAATTTCAGGTGGTTCTTCTGGGCAGACTTCTCCTCCACCTTGTACCCTACTGAGCGTTGGGCAGGCTTATTCTGGAACTCAAAATGTTTCTAGTGTACAAAAGGATGAGGCATGGAGAGTAAATGTCCGGATACAAGGTTGTGACCTTGAGCATGGATATTTATGTGGCACAATGGAAGCTCTCAATGTTCCAATGGCAGATACACCTGTGGTAACTTTCTGGGAAGGAGAAATTGTTGATACAAAGAACTATACCTTCTTCACTGGAAAGTGGGAAGCAACGCCTGAAGATGATATTAGACACTGGACAAAATTCCCATCCTTTTCACCCCTTCATAGTCAAGTGGAGACAGATGGGGGCAAGTCACTAGATTTGAGTAATTATCCATACATATTTATGAGATGGAAAGAACAGTACTTCGTAAATGTTGGTACAGACTGTGGGTTAACTATAGCGGGGTTTTATTATGTTTGCTTCTCCTGTAGTGATGGCTCCATCAATGGCTTCTATTATGATCCTAATAGCAGCCCTTTTCAGAAGCTCGAGCTCAAATCTACCAATGAAGGTCGATCTGGCTTCAGCTTTTCATCATACGAGTTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293486.p1 GENE.S_Transcript_293486~~S_Transcript_293486.p1 ORF type:complete len:215 (-),score=37.32,Vac_ImportDeg|PF09783.5|1.9e-49 S_Transcript_293486:526-1170(-)
MPVRVSEASVPSQISGGSSGQTSPPPCTLLSVGQAYSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEATPEDDIRHWTKFPSFSPLHSQVETDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSINGFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ*

Click here to download the sequence:
Link to NCBI Protein BLAST