Transcript Information: S_Transcript_293487.p1


Annotated TAIR IDAT2G37680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15803500-15805515 | Reverse length=215
E-Value1.5E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.59492697043873
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.2436968986704
Replicate 30.81361433564891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293487.p1 GENE.S_Transcript_293487~~S_Transcript_293487.p1 ORF type:complete len:93 (+),score=20.71,Vac_ImportDeg|PF09783.5|5.2e-06 S_Transcript_293487:541-819(+)
ATGCCAGTGAGAGTTTCTGAAGCCTCTGTGCCTTCCCAAATTTCAGGTGGTTCTTCTGGGCAGACTTCTCCTCCACCTTGTACCCTACTGAGCGTTGGGCAGGCTTATTCTGGAACTCAAAACGTTTCTAGTGTACAAAAGGATGAGGCATGGAGAGTAAATGTCCGGATACAAGGTTGTGACCTTGAGCATGGATATTTATGTGGCACAATGGAAGCTCTCAATGTTCCAATGGCAGATACACCTGTAAGGAGCTTTCCAATGTGCATTAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293487.p1 GENE.S_Transcript_293487~~S_Transcript_293487.p1 ORF type:complete len:93 (+),score=20.71,Vac_ImportDeg|PF09783.5|5.2e-06 S_Transcript_293487:541-819(+)
MPVRVSEASVPSQISGGSSGQTSPPPCTLLSVGQAYSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVRSFPMCIKF*

Click here to download the sequence:
Link to NCBI Protein BLAST