Transcript Information: S_Transcript_293491.p1


Annotated TAIR IDAT2G37680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15803500-15805515 | Reverse length=215
E-Value2.2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2649362753345
Replicate 24.6942105441521
Replicate 35.4935809610725
Condition 2: 8 Hour
Replicate 13.6298536710014
Replicate 25.9499597446081
Replicate 36.576165750473
Condition 3: 24 Hour
Replicate 15.3450246838688
Replicate 24.3398788124921
Replicate 38.0495886399307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293491.p1 GENE.S_Transcript_293491~~S_Transcript_293491.p1 ORF type:complete len:94 (+),score=19.79,Vac_ImportDeg|PF09783.5|8.4e-06 S_Transcript_293491:540-821(+)
ATGCCAGTGAGAGTTTCTGAAACCTCTGTGCCTTCCCACATTTCAGGTGGTGGTTCTGGGCAGACTTCTCCTCCAGCTTGTACCCTACTGAGCGTTGCGCAGGCTTATTCTGGAACTCAAAACGTTTCTAGTGTACAAAAGGATGAGGCATGGAGAGTAAATGTCCGGATACAAGGTTGTGACCTTGAGCATGGATATTTATGTGGCACAATGGAAGCTCTCAATGTTCCAATGGCAGATACACCTGTAAGGAGCTTTGTTCCAATGTGCATTAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293491.p1 GENE.S_Transcript_293491~~S_Transcript_293491.p1 ORF type:complete len:94 (+),score=19.79,Vac_ImportDeg|PF09783.5|8.4e-06 S_Transcript_293491:540-821(+)
MPVRVSETSVPSHISGGGSGQTSPPACTLLSVAQAYSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVRSFVPMCIKF*

Click here to download the sequence:
Link to NCBI Protein BLAST