Transcript Information: S_Transcript_29371.p1


Annotated TAIR IDAT4G05160.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2664451-2666547 | Forward length=544
E-Value7.7E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.222159148862
Replicate 21.5790465687287
Replicate 31.5766156095324
Condition 2: 8 Hour
Replicate 11.5686668821748
Replicate 20.44476836261882
Replicate 30
Condition 3: 24 Hour
Replicate 12.518893126152
Replicate 21.6220620611302
Replicate 32.8581640777169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29371.p1 GENE.S_Transcript_29371~~S_Transcript_29371.p1 ORF type:complete len:503 (+),score=93.43,AMP-binding|PF00501.24|3.8e-104 S_Transcript_29371:316-1824(+)
ATGGAGAGTTCTGGGTATGGCCGAGATGGGATATACAGGTCACTGAGACCACCATTGATCATACCCACAAACCAGAATCTTTCAATGGTTTCATTTCTCTTCAGAAACATCTCGTCATACCCTGAAAAACCAGCCCTTATTGACTCAGATTCAGGTCAAACCATCAACTTTTCTGAGCTCAAATCCTTGGTTGCAAAGCTTTCTCATGGGCTTACCCATCTGGGTATCAAAAAAGGTGATGTTGTTCTCATGTTTGCTCCAAATTCAATCCAATACCCCATAACTTTTCTAAGTATTGTTGCAATTGGTGCTATTGCAACCACTGTTAATCCTATGTACACAGTGTCAGAGATTAAGAAACAGGTGGTTGATTGTAAGCCAAAGTTGTTAGTTACTGTGCCAGAATTGTGGGACAAAGTTAAGGATTTCAACTTGCCTGGTTTGATCTTAGGGGACAAGGGTAATAATGGGTTTTACTCAAAAAGTGTTTTTTTCCATGATTTGGTTAATGGGTCTGCCTTAGATTTACCAGTGGTGCAAATTAAGCAAAGTGATACAGCTGCTTTGTTGTATTCTTCTGGTACTACTGGTGTTAGTAAAGGTGTGGTTTTGACTCATAGGAATTTCATTTCTACTTCAAGTATGGCTTCACAGGACCAAGAGGTTGAGGGTGAGAAGCATAACTTGTTCTTGTGTGTGCTTCCTATGTTTCATGTGTTTGGTCTGTCTGTGATCTTGTATAGTCAGTTGCAATGGGGTAATGGGGTTGTTACAATGGCGAAATTTGACTTCGAGTTGATGTTGAAAAGTATTGAGAAGTATAAGGTTACTCATTTGTGGCTTGTTCCTCCTATCATACTTGCTTTGGCTAAGTATAGTGTTGTTAAGAAGTATGACCTTTCTTCTTTGAAACAAATTGGGTCTGGGGCTGCTCCTCTTGGAAAGGAGGTTATGGTTGAGTGTTCTAAAGTTGTGCCTCAGGCTCAGATTGTTCAGGGGTATGGTATGACAGAAACCTGTGGAATTGTCTCTCTCGAACACCCAAGATTAGGTGGTCGATTTTCTGGTTCAACTGGAATGCTGGTTGCGGGTGTTGAAGCTCAGATTGTTCAGGTAGATACAATGAAGCCTCTTCCTCCTAAGGAAATGGGCGAAATATGGGTTCGTGGGCCCAATATGATGACTGGTTACTTCAATAATCCAAAAGCCACCAAGCTAACCATTGATAATCAAGGATGGGTGCATACCGGAGATCTTGGATATTTCGATGAGCAAGGGCAGTTATATGTGGTTGATAGACTTAAAGAACTTATCAAGTACAAGGGCTTTCAGGTATTCCACGTCATTGCTAAAATAATTATCTGGTTCAACAAACTCCTAAAACTTGATTTATCCTGTATGTATTTATCACGAGCAGATCAAGAAACTTTTACGTTTACCCCCACTGATATCAATAGGTTGCACCTGCTGAACTTGAAGCTATTCTTATATCTCATCCTGAAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29371.p1 GENE.S_Transcript_29371~~S_Transcript_29371.p1 ORF type:complete len:503 (+),score=93.43,AMP-binding|PF00501.24|3.8e-104 S_Transcript_29371:316-1824(+)
MESSGYGRDGIYRSLRPPLIIPTNQNLSMVSFLFRNISSYPEKPALIDSDSGQTINFSELKSLVAKLSHGLTHLGIKKGDVVLMFAPNSIQYPITFLSIVAIGAIATTVNPMYTVSEIKKQVVDCKPKLLVTVPELWDKVKDFNLPGLILGDKGNNGFYSKSVFFHDLVNGSALDLPVVQIKQSDTAALLYSSGTTGVSKGVVLTHRNFISTSSMASQDQEVEGEKHNLFLCVLPMFHVFGLSVILYSQLQWGNGVVTMAKFDFELMLKSIEKYKVTHLWLVPPIILALAKYSVVKKYDLSSLKQIGSGAAPLGKEVMVECSKVVPQAQIVQGYGMTETCGIVSLEHPRLGGRFSGSTGMLVAGVEAQIVQVDTMKPLPPKEMGEIWVRGPNMMTGYFNNPKATKLTIDNQGWVHTGDLGYFDEQGQLYVVDRLKELIKYKGFQVFHVIAKIIIWFNKLLKLDLSCMYLSRADQETFTFTPTDINRLHLLNLKLFLYLILKY*

Click here to download the sequence:
Link to NCBI Protein BLAST