Transcript Information: S_Transcript_293889.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10235769705839
Replicate 20
Replicate 30.42560160192924
Condition 2: 8 Hour
Replicate 10.65616585591178
Replicate 20.51627343014754
Replicate 30.40992014624964
Condition 3: 24 Hour
Replicate 10.25205634796839
Replicate 20.17433701212575
Replicate 30.8730707678694


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293889.p1 GENE.S_Transcript_293889~~S_Transcript_293889.p1 ORF type:complete len:260 (+),score=38.90,RVT_1|PF00078.23|2.8e-17 S_Transcript_293889:856-1635(+)
ATGTGCTCCACACTCATAACCTGGTCCATGGTTATGGGAGGAAGAATAATTCACCTCGAGTTGGTTGCTGATACTGTTTCTTGGGATTTCTTAAAGGCAGCTTTAGATTACTTTGGTTTTCCTAGTGTTTTTGTGGAAAGGATAATGAGTTGTTTATCTACAACTCAGTTTTCTATCAACATTAATAGAGGTTTTAGGGGTTTGTTTAAGGGAGAATGTGGACTAAGGCAAGGAGATCCTGTGTCTCCTTACCTTTTTGTGCTTTGCATGGAAAGTTTGTCAAGGATGTTAAGGGGTTGCTTTGATAATAGGAATTTCAGGACTCACCTAAATGCAAAAGAACGAAGTTCAATCATCTACTCTTTGCTGATGATTTGTTATTATTTTTCAAGGGGTGATAAGGAGTCTTTTATGGCTCTGTTGGAAGTTTTTGGACAGTTCTCTTCTATGTCTGATCTTTATGCTAATCAGACTAAGAATTGTATCTATTTTGGTGGGGTTAATGAGGAGAAGAAGGAGGAGATGCTTCAGGCCACAGGTTTCACAGAAGGAGAGCTACCATTCCGATATCTTGGGGTTCCATTGTCTGCCACTAACCTCACTAAGAATAATTGTGTTCCTTTGATTGAAGCAATTTCCAGGAAGATTAAGCATTCGGCAAATTTGTTCCTGAGCTATGCAGGGAGAATACAACTGCTAAAATCAGTAGTGACTTTGTCTATGGGTTATTGGTGTTCAGTTTTTTTGCTTCCTAGACAAGTGATCTATGAAATACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293889.p1 GENE.S_Transcript_293889~~S_Transcript_293889.p1 ORF type:complete len:260 (+),score=38.90,RVT_1|PF00078.23|2.8e-17 S_Transcript_293889:856-1635(+)
MCSTLITWSMVMGGRIIHLELVADTVSWDFLKAALDYFGFPSVFVERIMSCLSTTQFSININRGFRGLFKGECGLRQGDPVSPYLFVLCMESLSRMLRGCFDNRNFRTHLNAKERSSIIYSLLMICYYFSRGDKESFMALLEVFGQFSSMSDLYANQTKNCIYFGGVNEEKKEEMLQATGFTEGELPFRYLGVPLSATNLTKNNCVPLIEAISRKIKHSANLFLSYAGRIQLLKSVVTLSMGYWCSVFLLPRQVIYEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST