Transcript Information: S_Transcript_293927.p1


Annotated TAIR IDAT2G44640.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18417286-18419063 | Forward length=451
E-Value6E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.92209877282
Replicate 28.7996097079105
Replicate 37.7821949948141
Condition 2: 8 Hour
Replicate 113.436228581315
Replicate 213.448972592668
Replicate 310.719530298459
Condition 3: 24 Hour
Replicate 13.2830460737309
Replicate 26.1572204860597
Replicate 35.8316865676569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_293927.p1 GENE.S_Transcript_293927~~S_Transcript_293927.p1 ORF type:5prime_partial len:173 (-),score=31.93,DUF3769|PF12600.4|1.5e-06 S_Transcript_293927:96-614(-)
GGGGCATTTAGCTGGACCAGGAGCCGGGGTGGAGTGTGGTTTCTGGGTGAGAATGTTTTAAAGACTACATCAGAGGATGGCAGTGGCATTTCTTCTACTTCTGCAAAAAGAAGCCCTCTATTTGCTGATTTATTTGGCTCAGTGTGCTGTACTTTTCAGCATGGGAAGTTCAGGAAACGATTTGGGGATTTGACCAGGGTAGATGCCCGTCTAGATATATCTTCAGCTTCTGCTTATGCCAAACATATCTCAAGCTATTTCTGCAAGTCTTCTAATGTTACCCGGGATGCCTTTTTACCCCAACTGAGTCTCATCTTCCAGCAGCAGGTTGCAGGTCCAATTGTGTTCCGTATTGATGCAAGTGTACGTAACTCACCTGCGAAAGGTGCCTTGCATGTTGATGATATCATGTACAGCTTGAACTATTCCTTGCGGCTCTTGCAATCAGGAAAAGTCATGGTGTGGTACTCACCGAAGAGGAAAGAGGGAATGATTGAGTTGAGGCTGTTTGAGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_293927.p1 GENE.S_Transcript_293927~~S_Transcript_293927.p1 ORF type:5prime_partial len:173 (-),score=31.93,DUF3769|PF12600.4|1.5e-06 S_Transcript_293927:96-614(-)
GAFSWTRSRGGVWFLGENVLKTTSEDGSGISSTSAKRSPLFADLFGSVCCTFQHGKFRKRFGDLTRVDARLDISSASAYAKHISSYFCKSSNVTRDAFLPQLSLIFQQQVAGPIVFRIDASVRNSPAKGALHVDDIMYSLNYSLRLLQSGKVMVWYSPKRKEGMIELRLFEF*

Click here to download the sequence:
Link to NCBI Protein BLAST