Transcript Information: S_Transcript_29394.p1


Annotated TAIR IDAT3G55080.1
Annotated Gene NameSET domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20411476-20415830 | Reverse length=463
E-Value6.2E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0556529756698
Replicate 25.7689130379929
Replicate 35.5954009674796
Condition 2: 8 Hour
Replicate 15.4484031149561
Replicate 25.0459459007767
Replicate 37.0201893309819
Condition 3: 24 Hour
Replicate 15.2759099847543
Replicate 25.5641693091631
Replicate 36.0412082407464


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29394.p1 GENE.S_Transcript_29394~~S_Transcript_29394.p1 ORF type:complete len:501 (+),score=88.40,SET|PF00856.24|4.8e-10,Rubis-subs-bind|PF09273.7|4.9e-09 S_Transcript_29394:64-1566(+)
ATGCTTTCATCCACACGAGCTCTCAACTCAGCTCCCTTCCAACGTTCAATCTTCGTTCTCTCTCATCATTTTCTCTTCAGAGTCCATCATCGCGTTCCTCCTGCTGCATTCAAGGTCGTGAAGTGTAGAGATGAAGATTGCGATGATTTCTTGCCTTGGTTGGAGAACAAGGCCGGAATGGAGATTTCTTCGGTCCTTTCTATCGGAAAATCTAAATTCGGCAGGTCCTTGTTTGCTTGTAGAAACATACAAGCTGGAGAATGCCTGTTAAGAGTTCCTTTTGATGTGCAAATATCTCCTGATAATATGGTCCCTGAAATTAAGAGCTTGCTTGGTGACGAAGTTGGAGACTTTGGAGTCACTGCAAAGCTTGCAGTTGTTCTTCTGTTTGAGCAGAGAAAGGGTCAGGATTCTGAATGGGCACCTTATGTAACTTGTCTTCCTCAACCTGAAGAGATGCATAGCACGATATTTTGGAGCGAAGTTGAGCTTGAGATGATACGACCAAGTTCAGTATATCAGGAAACAATTGATCATCAAGCGCAAATTAGAAAGGACTATTTGGCAATTAAACCAGTTTTTGATCGCATTCCTATATTTGAGGATGTTACTCTTCAAGCCTTCAAATATGCCTATGGTTTAGTCAGCTCTCGAGCATGGGGAAGCATGAACGGATTATCATTGATTCCATTTGCAGACTTTTTAAATCATGATGGAATGTCAAATTCTGTAGTATTATGTGATGAAGATAAACAAATTTCTGAGGTTATTGCCAGCCGGAATTATGTTCAAGGTGAAGAGGTCTTTATACGATATGGCAAGTTCCCTAACTGTACACTTCTGTTGGACTTTGGATTTGCAGTTCCTTTCAACATTCATGATCAGGTTTGCATTGATATTGAGATACCTTATCATGATCCACTACGAGCAATGAAATTGGACCTTCTACATAAGCATTGTTTGCCAAAGATTAAGGATGCGAGATTTAGCTCCGCAGGTGGTTCTTTCGTGCTAAAAAAAGTGAGGTCTTCGAAAGGAAAGGGGAAGGGAATTCCACAGTCACTTCGTGCATTTGCTCGTGTCCTATGTTGCTCCTCTCCGCAAGAACTGAATGACCTGGCAACGGAAGCCTCTCAAAATGATGGCCGATTGGCACGACTTCCTTTGACTGACAGAAGCCTGGAGATGCATGCACATCAGATCCTACTTTTGCTGATTGAAGAGTTGATTGATGAATATGTTGAGTTAGTTAAGTCTCTACGTAAGCTGAAATCCACCAACCACGACATGGACTCACTTAGACGACAAATGGCCCTGGAACTCCTTGCTGGTGAGGTTGATGTCTTGAGATCTGCTTCTGCATGGTTGAAGAATTACTGTTTTTCTCTTCAAGAACATAGGGGAGAGATCAGTAGGCTGAATATCCGAAATACTGCAAGAAAGATGACTGGTAAAACAAATCAACAACAAAATCCATGTGTTAATATTCTTGATTCAGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29394.p1 GENE.S_Transcript_29394~~S_Transcript_29394.p1 ORF type:complete len:501 (+),score=88.40,SET|PF00856.24|4.8e-10,Rubis-subs-bind|PF09273.7|4.9e-09 S_Transcript_29394:64-1566(+)
MLSSTRALNSAPFQRSIFVLSHHFLFRVHHRVPPAAFKVVKCRDEDCDDFLPWLENKAGMEISSVLSIGKSKFGRSLFACRNIQAGECLLRVPFDVQISPDNMVPEIKSLLGDEVGDFGVTAKLAVVLLFEQRKGQDSEWAPYVTCLPQPEEMHSTIFWSEVELEMIRPSSVYQETIDHQAQIRKDYLAIKPVFDRIPIFEDVTLQAFKYAYGLVSSRAWGSMNGLSLIPFADFLNHDGMSNSVVLCDEDKQISEVIASRNYVQGEEVFIRYGKFPNCTLLLDFGFAVPFNIHDQVCIDIEIPYHDPLRAMKLDLLHKHCLPKIKDARFSSAGGSFVLKKVRSSKGKGKGIPQSLRAFARVLCCSSPQELNDLATEASQNDGRLARLPLTDRSLEMHAHQILLLLIEELIDEYVELVKSLRKLKSTNHDMDSLRRQMALELLAGEVDVLRSASAWLKNYCFSLQEHRGEISRLNIRNTARKMTGKTNQQQNPCVNILDSA*

Click here to download the sequence:
Link to NCBI Protein BLAST