Transcript Information: S_Transcript_29397.p1


Annotated TAIR IDAT3G55080.1
Annotated Gene NameSET domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20411476-20415830 | Reverse length=463
E-Value9E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2062591697559
Replicate 23.658079097619
Replicate 33.0578629775918
Condition 2: 8 Hour
Replicate 13.425321760783
Replicate 23.1297404832778
Replicate 33.4237889935462
Condition 3: 24 Hour
Replicate 12.2637184964346
Replicate 22.5834396615525
Replicate 32.0909466864345


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29397.p1 GENE.S_Transcript_29397~~S_Transcript_29397.p1 ORF type:complete len:193 (+),score=25.38,SET|PF00856.24|6.1e-07 S_Transcript_29397:576-1154(+)
ATGATAAGACCAAGTTCAGTGTATCAGGAAACAATTGGTCATCAAGCGCAAGTTAGAAAGGACTATTTGGCACTTAAACCAGTTTTTGATCGCGTTCCTATATTTGAGGATATTACTCTTCAGGCCTTCAGATATGCCTATGGTTTAGTCAGCTCTCGAGCATGGGGAAGCATGAACGGATTATCATTGATTCCATTTGCAGACTTTTTAAATCATGATGGAATGTCAAATTCTGTAGTATTATGTGATGAAGATAAACAAATTTCTGAGGTTATTGCCAGCCGGAATTATGTTCAAGGTGAAGAGGTCTTTATACGATATGGCAAGTTCCCTAACTGTACACTTCTGTTGGACTTTGGATTTGCAGTTCCTTTCAACATTCATGATCAGGTTTGCATTGATATTGAGATACCTTATCATGATCCACTACGAGCAATGAAATTGGACCTTCTACATAAGCATTGTTTGCCAAAGATTAAGGATGCGAGATTTAGCTCCGCAGGTGGTTCTTTCGTGCTAAAGTATGTATTTTTGCTTGATTCATTGCCTGAGAAAGATATCATGTTAATGACATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29397.p1 GENE.S_Transcript_29397~~S_Transcript_29397.p1 ORF type:complete len:193 (+),score=25.38,SET|PF00856.24|6.1e-07 S_Transcript_29397:576-1154(+)
MIRPSSVYQETIGHQAQVRKDYLALKPVFDRVPIFEDITLQAFRYAYGLVSSRAWGSMNGLSLIPFADFLNHDGMSNSVVLCDEDKQISEVIASRNYVQGEEVFIRYGKFPNCTLLLDFGFAVPFNIHDQVCIDIEIPYHDPLRAMKLDLLHKHCLPKIKDARFSSAGGSFVLKYVFLLDSLPEKDIMLMTF*

Click here to download the sequence:
Link to NCBI Protein BLAST