Transcript Information: S_Transcript_294142.p1


Annotated TAIR IDAT2G14000.1
Annotated Gene NameArabidopsis retrotransposon ORF-1 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5884600-5885985 | Reverse length=346
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.086126217589581
Replicate 20
Replicate 30.11937046008803
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294142.p1 GENE.S_Transcript_294142~~S_Transcript_294142.p1 ORF type:complete len:309 (-),score=20.49,ATHILA|PF03078.11|1.6e-12,ATHILA|PF03078.11|0.2 S_Transcript_294142:192-1118(-)
ATGGCACCAAAGCGTCAAAGGACATCTACGGACCCCTCAAGGGGCAAAGGTGTAGACTCTTCCTCTTCTAATGATGATTCTAAGTATATTGCTGAATGTAGAAAAATTTTGAGTCATCTTAGATCTAGGAGGGTTTTAAACCCTCGCTTTCTCACCAAGGGTGTCCTTAAACAATTGGGTTTGTGGAAAGATATCATAACTATTTTTGCGGTCGAGGGCCTCCAAGAGTGGCCCTTTCATGACGAACCGGTTTTTGAGGAACTCACTCGTGAGTTCCTTAGTTCATTTAGGCTTGACCACAAGACGGGCTCCGTCCGTTTCTCTTTGAATCGGGCACCTTTCACCCGATCTACTGATTCCCTAAATGGACTGCTGCAAATTGAAGAGGGAGGTCTCACTAATCCAGACCACACCGACTATCGTCAACAGAAGTTCTGGTCATCTATTTGCTGTAATGTCAATGCTTATCACCCTTCAACGGCGAAGGCGTCCTCAATTTGTAACCCTATCCTTCGTGTTTGCCAATCCTTTTTGGCACATACAATTTTTGCGCAGGGGGACAACCTAGGGACAATGGGCGCCTTCGAGCTCTTTATGCTCTGGGCTATGGTCAATAAAATCAAGGTCAATTGGGGTCACTTTCTAGCAGTCCGCCTCTCTAAGATGCAGGACTTGAAACAAACCTCTCCTATCCTCATAGGTGGCCTCATTACTCAGTTAGCCCTAGCCCTAGGGATCATCGACTTTGAGAGGATGCATAAGCACAATCCTCTCTTCCTTGACCAGGACTACCTTATCTTCCAGGGGATCTTTAGGAAGTGTGGTTTGGACGTGTGGTACATCCACCAACGCCATGACTTTATCCTCCTCCCCAATAAGGAGCGGACTACTCTTGAAGATCGTGAGAATTGGAATTACCGCCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294142.p1 GENE.S_Transcript_294142~~S_Transcript_294142.p1 ORF type:complete len:309 (-),score=20.49,ATHILA|PF03078.11|1.6e-12,ATHILA|PF03078.11|0.2 S_Transcript_294142:192-1118(-)
MAPKRQRTSTDPSRGKGVDSSSSNDDSKYIAECRKILSHLRSRRVLNPRFLTKGVLKQLGLWKDIITIFAVEGLQEWPFHDEPVFEELTREFLSSFRLDHKTGSVRFSLNRAPFTRSTDSLNGLLQIEEGGLTNPDHTDYRQQKFWSSICCNVNAYHPSTAKASSICNPILRVCQSFLAHTIFAQGDNLGTMGAFELFMLWAMVNKIKVNWGHFLAVRLSKMQDLKQTSPILIGGLITQLALALGIIDFERMHKHNPLFLDQDYLIFQGIFRKCGLDVWYIHQRHDFILLPNKERTTLEDRENWNYRL*

Click here to download the sequence:
Link to NCBI Protein BLAST