Transcript Information: S_Transcript_29426.p1


Annotated TAIR IDAT1G75380.1
Annotated Gene Namebifunctional nuclease in basal defense response 1
Annotated Gene Symbol(s)ATBBD1, BBD1
Annotation TypeOrtholog
Chromosome Positionchr1:28281789-28283631 | Reverse length=325
E-Value7.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93378951702388
Replicate 20.77413296693034
Replicate 31.941340640379
Condition 2: 8 Hour
Replicate 12.7436174677013
Replicate 22.2895166736562
Replicate 33.178679028813
Condition 3: 24 Hour
Replicate 11.6607221367118
Replicate 21.5904429176384
Replicate 30.73748667851217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29426.p1 GENE.S_Transcript_29426~~S_Transcript_29426.p1 ORF type:5prime_partial len:342 (+),score=41.89,DNase-RNase|PF02577.10|8.9e-18 S_Transcript_29426:1-1026(+)
ATTCTGTCCTTGTTTAATTCTCCTGAAAGACTCCTCTGCTTTCTTCTGACACCTTCTTCGGTTTCCCTCACTTACAAGTTTCCTCTCTCCCCTTTCTCACAATCTATCTATCTATCTATCTTTCTCCTCCTCATCTCCACAATTCCTCCTAATTCATCCTCTAATCAATTCAGTTTCCACCGCACCGTTTTATCTGTCTCGAACAAAAAAATGGCGGCACTACAAGCAGCCGTAGCTAATAGAATCGGCGGTGATAGACTGTTGAGCGCTTTAGTCACCAAACAAGTTTATCTCAATGCGATGTTCGTTAACGGTCAAATTTCGGCGGTCAAAAAAAGCAATAAATATCGCGGTGGCGGTGGTGTTAGGGTTCGGAGTTGTCCTCGTACTGGAACTTGTACGAAAATTCGGTGTCACTTGAGCTCCCCAAATGACGGTGATAGCGCTACCGGAAATTCTCAGGGAGGTGATGCTGATTTTATCAATTCCACTGTCATCGAGGCTGTTGAGGTGAAAAATGGATCAGATGGCTTCATGATAAAAATGAGAGATGGAAGATACCTTAGATGTGTGTATAACCATCCCAAAGGGGGTTATCCACCAGATTATATTTCGCACCCTGCTATGGTTCTGAAGATGGAAGATGGAAGCGGTCTTCTGTTCCCAATCATTGTTTTGGAGATGCCTAGTGCTTTGTTGATGGCTGCATTGCGCAATGTTGAAATGGCTAGGCCAACCATATATCAGATAGTGTCAGAAATGATTGAAACAATGGGGTACATGGTGAAATATGTTAGAGTTACAAAGAGGGTGCAAGAGGCTTACTTCGCTGAGCTGTGTGTTGTAAAAGTGAATGATGAAACAGAGTGTCATAGTTTTGATCTTCGGCCTTCTGATGCCATCAACATTGCTGTAAGATGTAAGGTATACACTGGTGCACTGATTAGCAACTTAAAAATGGTTTATATGGATTGTGTGCCGATTGAGTCCATCATGGTGCTAACAATCGCTGATCAGTACACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29426.p1 GENE.S_Transcript_29426~~S_Transcript_29426.p1 ORF type:5prime_partial len:342 (+),score=41.89,DNase-RNase|PF02577.10|8.9e-18 S_Transcript_29426:1-1026(+)
ILSLFNSPERLLCFLLTPSSVSLTYKFPLSPFSQSIYLSIFLLLISTIPPNSSSNQFSFHRTVLSVSNKKMAALQAAVANRIGGDRLLSALVTKQVYLNAMFVNGQISAVKKSNKYRGGGGVRVRSCPRTGTCTKIRCHLSSPNDGDSATGNSQGGDADFINSTVIEAVEVKNGSDGFMIKMRDGRYLRCVYNHPKGGYPPDYISHPAMVLKMEDGSGLLFPIIVLEMPSALLMAALRNVEMARPTIYQIVSEMIETMGYMVKYVRVTKRVQEAYFAELCVVKVNDETECHSFDLRPSDAINIAVRCKVYTGALISNLKMVYMDCVPIESIMVLTIADQYT*

Click here to download the sequence:
Link to NCBI Protein BLAST