Transcript Information: S_Transcript_29436.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value8.3E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.361219972755
Replicate 228.329143988052
Replicate 326.081739195151
Condition 2: 8 Hour
Replicate 131.924992604939
Replicate 232.498750538775
Replicate 332.099900683241
Condition 3: 24 Hour
Replicate 128.631015935897
Replicate 225.345919455205
Replicate 325.968258736628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29436.p1 GENE.S_Transcript_29436~~S_Transcript_29436.p1 ORF type:complete len:338 (-),score=49.96,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|2.5e-74 S_Transcript_29436:377-1357(-)
ATGGAGGAAGATAGCATTGAATGCATAACAACTTCATCTCCTGAGAGATTGTATGAGGTAGAGGTCAATTACCCTCCAAATAATCACCACCATCAAAATCAAAATCATCATAATCAATCTTCAAAATCTAGGAGGAAAGTAGGAGTGTCTCCGTTGATTTCTTCGGCTAATAGCGTCATCGAGCTCCTGGAATGCCCCGTTTGTGCCAATTCTATGTACCCTCCTATCCACCAGTGCCACAATGGACACACACTTTGCTCAGCATGTAAAACAAGAGTTCATAACAGGTGCCCCACCTGTAGACAAGAGCTTGGGGAAATCAGATGTTTGGCATTAGAGAAGGTGGCTGAATCTCTTGAACTTCCATGCAAATATAGCTCCCTTGGTTGTCCAGAGATCTCTCCTTACTATAGCAAACTGAAGCATGAAGCACTTTGTAACTTTAGACCGTTCAGCTGCCCATACGCTGGTTATGAATGCTCTGTTGTTGGGGATATCCCTTTTCTGGTTTCCCACTTGAGGGATGATCATAAAGTGGATATGCACACTGGTTGCACATTCAATCACCGCTATGTGAAGTCTAATCCCTTGCAAGTTGATAATGCCACCTGGATGCTAACAGTCTTCCATTGTTTTGGGCAGTATTTCTGCCTGCATTTTGAAGCATTCCAGCTTGGGATGGCTCCTGTTTATATGGCATTTCTACGTTTCATGGGTGATGAGACAGAGGCTCGAAAGTTCAGCTACAGCTTAGAAGTGGGTGGATATGGGAGAAAACTAACATGGGAGGGAACCCCAAGAAGTATTCGTGATAGCCACAGGAAGGTTAGAGACAGTCACGATGGTCTCATAATCCAGCGTAAATTAGCACTTTTCTTCTCAGGAGGAGATAGGAAAGAACTAAAGCTTCGGGTTACTGGAAGAATATGGAAGGAACAGAATCTAGAATCTGGGGCATGCATATCTACACTTTGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29436.p1 GENE.S_Transcript_29436~~S_Transcript_29436.p1 ORF type:complete len:338 (-),score=49.96,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|2.5e-74 S_Transcript_29436:377-1357(-)
MEEDSIECITTSSPERLYEVEVNYPPNNHHHQNQNHHNQSSKSRRKVGVSPLISSANSVIELLECPVCANSMYPPIHQCHNGHTLCSACKTRVHNRCPTCRQELGEIRCLALEKVAESLELPCKYSSLGCPEISPYYSKLKHEALCNFRPFSCPYAGYECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPLQVDNATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARKFSYSLEVGGYGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRKLALFFSGGDRKELKLRVTGRIWKEQNLESGACISTLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST