Transcript Information: S_Transcript_294632.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.14807241313768
Replicate 30.37133025671679
Condition 2: 8 Hour
Replicate 10.1431234249472
Replicate 20.6005865406638
Replicate 30.42917813969761
Condition 3: 24 Hour
Replicate 10.58643982525085
Replicate 20
Replicate 30.3385509316123


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294632.p2 GENE.S_Transcript_294632~~S_Transcript_294632.p2 ORF type:3prime_partial len:149 (+),score=16.17,RVT_1|PF00078.23|7.4e-27 S_Transcript_294632:1114-1557(+)
ATGATCCTGCAAAATATTACTAAACACTACGAGCGGAAAAATACATCCCCAAGATGTATTATGAAAATTGACTTGAAGAAGGCATATGACTCTGTAAGCTGGCATTTTCTGGAAGAGATGCTGAGGGCATTAAATTTTCCTGAAGTATTCATCTCCTGGTTACGTACTTGCACTTGTAGTGCCTACTATACAATTGCACTGAATGGAGGTTATCATGGTTTTTTCAAGGGTGCACAAGGATTAAGGCAAGGTGATCCTCTATCCCCTCTTCTTTTTGTGATTTGTATGGAATATTTGTCTCGAATTATGCAAATTTTAGAGGAACTTGGGGATTTTTCTTATCACCCTCTTTGTAATAAGATGTCTATTAACCATATTTTCTTTGTTGATGATTTGATCCTCTTTTGTAATGGGGATTACATGTCTGTGAACATTATGCTGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294632.p2 GENE.S_Transcript_294632~~S_Transcript_294632.p2 ORF type:3prime_partial len:149 (+),score=16.17,RVT_1|PF00078.23|7.4e-27 S_Transcript_294632:1114-1557(+)
MILQNITKHYERKNTSPRCIMKIDLKKAYDSVSWHFLEEMLRALNFPEVFISWLRTCTCSAYYTIALNGGYHGFFKGAQGLRQGDPLSPLLFVICMEYLSRIMQILEELGDFSYHPLCNKMSINHIFFVDDLILFCNGDYMSVNIMLR

Click here to download the sequence:
Link to NCBI Protein BLAST